RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RPL7L1Q6DKI1 246 aaKnown RBP13.65□□□□□ -0.22
SREBF1-220ENST00000581707 ARL6IP6Q8N6S5 226 aa13.65□□□□□ -0.22
SREBF1-220ENST00000581707 TMED6Q8WW62 240 aa13.65□□□□□ -0.22
SREBF1-220ENST00000581707 RAB24Q969Q5 203 aa13.65□□□□□ -0.22
SREBF1-220ENST00000581707 TP53TG3Q9ULZ0 132 aa13.65□□□□□ -0.22
SREBF1-220ENST00000581707 KLF12Q9Y4X4 402 aa13.65□□□□□ -0.22
SREBF1-220ENST00000581707 IGLV2-18A0A075B6J9 118 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 TRGV1A0A0A0MS02 117 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 BORCS7-ASMTA0A0B4J1R7 106 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 TCL1AP56279 114 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 FAM3BP58499 235 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-220ENST00000581707 LGALS9BQ3B8N2 356 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 IBA57Q5T440 356 aaKnown RBP13.64□□□□□ -0.23
SREBF1-220ENST00000581707 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
SREBF1-220ENST00000581707 GNPNAT1Q96EK6 184 aaPredicted RBP13.64□□□□□ -0.23
SREBF1-220ENST00000581707 TRGV2A0A075B6R0 118 aa13.63□□□□□ -0.23
SREBF1-220ENST00000581707 TRAV26-1A0A087WT03 109 aa13.63□□□□□ -0.23
SREBF1-220ENST00000581707 HOXA5P20719 270 aa13.63□□□□□ -0.23
SREBF1-220ENST00000581707 ARPC5LQ9BPX5 153 aa13.63□□□□□ -0.23
SREBF1-220ENST00000581707 ACTR3CQ9C0K3 210 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-220ENST00000581707 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
SREBF1-220ENST00000581707 G3V3Q6 166 aa13.62□□□□□ -0.23
SREBF1-220ENST00000581707 SPINK4O60575 86 aa13.62□□□□□ -0.23
SREBF1-220ENST00000581707 GCHFRP30047 84 aa13.62□□□□□ -0.23
SREBF1-220ENST00000581707 SUN5Q8TC36 379 aa13.62□□□□□ -0.23
SREBF1-220ENST00000581707 A0A0J9YY99 117 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 CCL18P55774 89 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 GNG5P63218 68 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 MUC21Q5SSG8 566 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 Q6AWC8 147 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 Q6ZR54 194 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 LINC00336Q6ZUF6 198 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 ST6GAL2Q96JF0 529 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
SREBF1-220ENST00000581707 CXorf1O96002 111 aa13.6□□□□□ -0.23
SREBF1-220ENST00000581707 MUC4Q99102 2169 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 TRAV8-1A0A0A6YYK1 113 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 H3BNG1 76 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 FAM159AQ6UWV7 190 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 TMEM167BQ9NRX6 74 aa13.59□□□□□ -0.23
SREBF1-220ENST00000581707 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 TAAR5O14804 337 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 ARPC5O15511 151 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 SSX7Q7RTT5 188 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 TVP23CQ96ET8 276 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 MRPL16Q9NX20 251 aaKnown RBP13.58□□□□□ -0.24
SREBF1-220ENST00000581707 MDFICQ9P1T7 246 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 LINC00588Q9Y4M8 146 aa13.58□□□□□ -0.24
SREBF1-220ENST00000581707 RTL8CO15255 209 aa13.57□□□□□ -0.24
SREBF1-220ENST00000581707 SUMO1P63165 101 aaKnown RBP13.57□□□□□ -0.24
SREBF1-220ENST00000581707 TMEM183BQ1AE95 376 aa13.57□□□□□ -0.24
SREBF1-220ENST00000581707 IQCF2Q8IXL9 164 aa13.57□□□□□ -0.24
SREBF1-220ENST00000581707 TMEM183AQ8IXX5 376 aa13.57□□□□□ -0.24
SREBF1-220ENST00000581707 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
SREBF1-220ENST00000581707 TRGV11A0A075B6L2 103 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 F6UZH7 168 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 SMLR1H3BR10 107 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 K7EQM0 130 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 TCRAP04437 139 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 SGK494Q96LW2 274 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 NAGKQ9UJ70 344 aa13.56□□□□□ -0.24
SREBF1-220ENST00000581707 HECTD4Q9Y4D8 3996 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 DNAH2Q9P225 4427 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 TRAV21A0A0B4J279 112 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 ZNF726P1Q15940 193 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 TDRG1Q3Y452 100 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 AKR1C8PQ5T2L2 129 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 NDFIP1Q9BT67 221 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 CYTL1Q9NRR1 136 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 EPDR1Q9UM22 224 aa13.55□□□□□ -0.24
SREBF1-220ENST00000581707 PRSS29PA6NIE9 313 aa13.54□□□□□ -0.24
SREBF1-220ENST00000581707 IGHV3-53P01767 116 aa13.54□□□□□ -0.24
SREBF1-220ENST00000581707 SPXQ9BT56 116 aa13.54□□□□□ -0.24
SREBF1-220ENST00000581707 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
SREBF1-220ENST00000581707 GNRH2O43555 120 aa13.53□□□□□ -0.24
SREBF1-220ENST00000581707 SOHLH1Q5JUK2 328 aa13.53□□□□□ -0.24
SREBF1-220ENST00000581707 C1orf134Q5TEV5 83 aa13.53□□□□□ -0.24
SREBF1-220ENST00000581707 PSG8Q9UQ74 426 aa13.53□□□□□ -0.24
SREBF1-220ENST00000581707 NBDYA0A0U1RRE5 68 aa13.52□□□□□ -0.25
SREBF1-220ENST00000581707 PAX4O43316 350 aa13.52□□□□□ -0.25
SREBF1-220ENST00000581707 ESRGQ1W209 222 aa13.52□□□□□ -0.25
SREBF1-220ENST00000581707 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
SREBF1-220ENST00000581707 A0A096LPF7 62 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 FGF8P55075 233 aaPredicted RBP13.51□□□□□ -0.25
SREBF1-220ENST00000581707 SLAQ13239 276 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 KCNRGQ8N5I3 272 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 RASL10AQ92737 203 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 C8orf49Q96NF6 230 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 SDF2L1Q9HCN8 221 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 PRO0255Q9UI72 69 aa13.51□□□□□ -0.25
SREBF1-220ENST00000581707 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
SREBF1-220ENST00000581707 IGHV3-16A0A0C4DH30 117 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms