RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 TIRAPP58753 221 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 MUC21Q5SSG8 566 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 FAM122CQ6P4D5 195 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 NHLRC2Q8NBF2 726 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 OR4C5Q8NGB2 326 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 BCL7BQ9BQE9 202 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 SPXQ9BT56 116 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 GPN1Q9HCN4 374 aaPredicted RBP6.62□□□□□ -1.35
RFFL-208ENST00000581039 UQCC1Q9NVA1 299 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
RFFL-208ENST00000581039 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 NOL3O60936 208 aaKnown RBP6.61□□□□□ -1.35
RFFL-208ENST00000581039 CST7O76096 145 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 NDUFB6O95139 128 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 PYYP10082 97 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 CAV2P51636 162 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 ZNF138P52744 262 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 OR10J3Q5JRS4 329 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 TMEM183AQ8IXX5 376 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 FLVCR2Q9UPI3 526 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 WDR83OSQ9Y284 106 aa6.61□□□□□ -1.35
RFFL-208ENST00000581039 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 TRGV11A0A075B6L2 103 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 TRAV4A0A0B4J268 109 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 NAP1L6A6NFF2 107 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 OXTP01178 125 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 IGHV3-30P01768 117 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 IGHV3-33P01772 117 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 PFN1P07737 140 aaKnown RBP6.6□□□□□ -1.35
RFFL-208ENST00000581039 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 IGHV3-30-5P0DP03 117 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 INPP1P49441 399 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 BAXQ07812 192 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 ZNF266Q14584 549 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 ZNF846Q147U1 533 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 FAM159AQ6UWV7 190 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 Q6ZSA8 131 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 Q8TAT8 98 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 LSM5Q9Y4Y9 91 aaKnown RBP6.6□□□□□ -1.35
RFFL-208ENST00000581039 V9GYH0 126 aa6.6□□□□□ -1.35
RFFL-208ENST00000581039 FAM24AA6NFZ4 105 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 NBEAP1P0C6P0 100 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 S100A11P31949 105 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 S100A5P33763 92 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 VWC2Q2TAL6 325 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 TDRG1Q3Y452 100 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 CHAC2Q8WUX2 184 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 MITD1Q8WV92 249 aa6.59□□□□□ -1.35
RFFL-208ENST00000581039 IGHV3-16A0A0C4DH30 117 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 UBE2L5PA0A1B0GUS4 154 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 FAM25EA8MYX2 175 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 H3BMQ9 156 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 M0R2P5 195 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 PVALBP20472 110 aaPredicted RBP6.58□□□□□ -1.36
RFFL-208ENST00000581039 FGF7P21781 194 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 CSN1S1P47710 185 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 BAK1Q16611 211 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 NAGKQ9UJ70 344 aa6.58□□□□□ -1.36
RFFL-208ENST00000581039 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
RFFL-208ENST00000581039 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.57□□□□□ -1.36
RFFL-208ENST00000581039 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 LECT2O14960 151 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 GATA1P15976 413 aaPredicted RBP6.57□□□□□ -1.36
RFFL-208ENST00000581039 SULT1A1P50225 295 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 HBG1P69891 147 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 HBG2P69892 147 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 WFDC2Q14508 124 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 LAGE3Q14657 143 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 GCSAMLQ5JQS6 135 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 LELP1Q5T871 98 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 Q6AWC8 147 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 PRADC1Q9BSG0 188 aa6.57□□□□□ -1.36
RFFL-208ENST00000581039 TRAV8-3A0A0A6YYJ7 113 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 C5orf51A6NDU8 294 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 FBLL1A6NHQ2 334 aaKnown RBP6.56□□□□□ -1.36
RFFL-208ENST00000581039 CENPXA8MT69 81 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 CCSO14618 274 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 GNRH2O43555 120 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 RANP62826 216 aaKnown RBP6.56□□□□□ -1.36
RFFL-208ENST00000581039 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 TRIQKQ629K1 86 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 STX12Q86Y82 276 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 FAM167A-AS1Q96KT0 104 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 PAXXQ9BUH6 204 aa6.56□□□□□ -1.36
RFFL-208ENST00000581039 RBFOX3A6NFN3 312 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 OR10J4P0C629 311 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 ASAH1Q13510 395 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 CNPY1Q3B7I2 92 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 SPANXN2Q5MJ10 180 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 TMEM252Q8N6L7 170 aa6.55□□□□□ -1.36
RFFL-208ENST00000581039 FXYD5Q96DB9 178 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms