RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 LGI3Q8N145 548 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 UBE2WQ96B02 151 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 SLC50A1Q9BRV3 221 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 TMEM222Q9H0R3 208 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 AUNIPQ9H7T9 357 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 C8orf4Q9NR00 106 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 CACFD1Q9UGQ2 172 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 RNF24Q9Y225 148 aa3.72□□□□□ -1.81
KPNB1-209ENST00000580158 IGHV1OR15-1A0A075B7D0 117 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 GPX1P07203 203 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 PGAM2P15259 253 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 CXCL2P19875 107 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 RNASE4P34096 147 aaKnown RBP3.71□□□□□ -1.82
KPNB1-209ENST00000580158 CCR6P51684 374 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 RAB31Q13636 194 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 MEF2DQ14814 521 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 KCNIP4Q6PIL6 250 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 LCN15Q6UWW0 184 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 CROCCP3Q8IVE0 287 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 OR4D10Q8NGI6 311 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 OR10G9Q8NGN4 311 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 Q8TAT8 98 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 THAP6Q8TBB0 222 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 RASL10AQ92737 203 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 ZNF331Q9NQX6 463 aaPredicted RBP3.71□□□□□ -1.82
KPNB1-209ENST00000580158 RABL2AQ9UBK7 228 aaPredicted RBP3.71□□□□□ -1.82
KPNB1-209ENST00000580158 KLK12Q9UKR0 248 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 TP53TG3Q9ULZ0 132 aa3.71□□□□□ -1.82
KPNB1-209ENST00000580158 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 A0A0A6YYH2 397 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 TEX13DA0A0J9YY54 714 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-209ENST00000580158 C3orf85A0A1B0GTC6 90 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 LINC00854A0A1B0GVQ3 168 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 PGPA6NDG6 321 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 A6NJ64 397 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 H3BRN7 92 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 CIB2O75838 187 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 PRSS1P07477 247 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 ATP5IP56385 69 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-209ENST00000580158 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-209ENST00000580158 MLLT11Q13015 90 aaPredicted RBP3.7□□□□□ -1.82
KPNB1-209ENST00000580158 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
KPNB1-209ENST00000580158 BTN1A1Q13410 526 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 OPCMLQ14982 345 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 RHOHQ15669 191 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 DHRSXQ8N5I4 330 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 PACRGLQ8N7B6 248 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 OR1S1Q8NH92 325 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 LINC00479Q96M42 142 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 TP53RKQ96S44 253 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 SHANK2-AS3Q9BTD1 123 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 TPPP3Q9BW30 176 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 DUSP21Q9H596 190 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 HIGD1AQ9Y241 93 aa3.7□□□□□ -1.82
KPNB1-209ENST00000580158 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.69□□□□□ -1.82
KPNB1-209ENST00000580158 IGHV3-16A0A0C4DH30 117 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 A0A0G2JRQ6 117 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 PMS2P5A8MQ11 134 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 KLLNB2CW77 178 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 TNFAIP8O95379 198 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 HLA-DQA1P01909 254 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 GNAO1P09471 354 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 OR5G3P0C626 314 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 GATA1P15976 413 aaPredicted RBP3.69□□□□□ -1.82
KPNB1-209ENST00000580158 PIGPP57054 158 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 POLR2GP62487 172 aaKnown RBP eCLIP3.69□□□□□ -1.82
KPNB1-209ENST00000580158 RAB11AP62491 216 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 GUK1Q16774 197 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 ATRAIDQ6UW56 229 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 Q6ZQT7 251 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 C8orf59Q8N0T1 100 aaPredicted RBP3.69□□□□□ -1.82
KPNB1-209ENST00000580158 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 SLC25A38Q96DW6 304 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 ZNF486Q96H40 463 aaPredicted RBP3.69□□□□□ -1.82
KPNB1-209ENST00000580158 DNAJC30Q96LL9 226 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 ANAPC10Q9UM13 185 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 PXMP4Q9Y6I8 212 aa3.69□□□□□ -1.82
KPNB1-209ENST00000580158 A0A087WWC5 75 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 A0A087WX48 190 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 A0A0U1RRA0 63 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 TRBV6-4A0A1B0GX49 114 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 TRDV1A0A1B0GX56 115 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 FBLL1A6NHQ2 334 aaKnown RBP3.68□□□□□ -1.82
KPNB1-209ENST00000580158 CIDEAO60543 219 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 HYPMO75409 117 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 CRPP02741 224 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 CHTF8P0CG12 524 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 RCVRNP35243 200 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 RND3P61587 244 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 SP6Q3SY56 376 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 KRTAP5-11Q6L8G4 156 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 Q6ZRP5 223 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 NIT1Q86X76 327 aa3.68□□□□□ -1.82
KPNB1-209ENST00000580158 SLC25A29Q8N8R3 303 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms