RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 LAGE3Q14657 143 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 ZNF672Q499Z4 452 aaPredicted RBP4.09□□□□□ -1.75
CDH8-206ENST00000580044 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 ORMDL2Q53FV1 153 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 KLF17Q5JT82 389 aaPredicted RBP4.09□□□□□ -1.75
CDH8-206ENST00000580044 TMEM78Q5T7P6 136 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 CEND1Q8N111 149 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 Q8N6K4 173 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 FAM110DQ8TAY7 271 aaPredicted RBP4.09□□□□□ -1.75
CDH8-206ENST00000580044 RNF185Q96GF1 192 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 MCRIP2Q9BUT9 160 aaKnown RBP4.09□□□□□ -1.75
CDH8-206ENST00000580044 DKK2Q9UBU2 259 aa4.09□□□□□ -1.75
CDH8-206ENST00000580044 CADP27708 2225 aa4.09□□□□□ -1.76
CDH8-206ENST00000580044 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 TRBV7-1A0A0A6YYK4 115 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 F8W1H4 67 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 SNAI2O43623 268 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 CTSGP08311 255 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 TMEM11P17152 192 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 GCSHP23434 173 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 ARFGEF3Q5TH69 2177 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 LYRM7Q5U5X0 104 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 PRSS57Q6UWY2 283 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 Q8TAT8 98 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 EEF1AKMT3Q96AZ1 226 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 VGLL1Q99990 258 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 HHLA3Q9XRX5 114 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 HILPDAQ9Y5L2 63 aa4.08□□□□□ -1.76
CDH8-206ENST00000580044 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 A0A087WX48 190 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 F8VRH5 84 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 SMKR1H3BMG3 65 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.07□□□□□ -1.76
CDH8-206ENST00000580044 H7C1H1 209 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 BUB3O43684 328 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 CLEC3BP05452 202 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 ZNF80P51504 273 aaPredicted RBP4.07□□□□□ -1.76
CDH8-206ENST00000580044 C15orf32Q32M92 178 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 C9orf47Q6ZRZ4 202 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 Q71RC1 249 aaPredicted RBP4.07□□□□□ -1.76
CDH8-206ENST00000580044 VMO1Q7Z5L0 202 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 DTX2Q86UW9 622 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 PCP2Q8IVA1 136 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 Q8NA96 180 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 ZNF502Q8TBZ5 544 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 TMEM158Q8WZ71 300 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 RAB37Q96AX2 223 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 METTL26Q96S19 204 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 FOXC2Q99958 501 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 SH3BGRL2Q9UJC5 107 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 SMAD5-AS1Q9Y6J3 95 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 CFAP54Q96N23 3096 aa4.07□□□□□ -1.76
CDH8-206ENST00000580044 PLXNB1O43157 2135 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 IGLV2-18A0A075B6J9 118 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 IGHV7-81A0A0B4J1V7 117 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 TRBV7-9A0A0J9YWB2 115 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 TMEM8BA6NDV4 472 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 FAM223BA6NKX1 122 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 KRTAP29-1A8MX34 341 aaPredicted RBP4.06□□□□□ -1.76
CDH8-206ENST00000580044 OR11H12B2RN74 326 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 E9PLD3 99 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 M0R381 172 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 SAP30O75446 220 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 IGHG4P01861 327 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 PAPPA-AS1Q5QFB9 102 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 SPANXN1Q5VSR9 72 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 SAMD13Q5VXD3 122 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 FAM223AQ8IWN6 122 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 DYNAPQ8N1N2 210 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 NRACQ8N912 160 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 OR11H1Q8NG94 326 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 OR11H2Q8NH07 326 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 RAX2Q96IS3 184 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 ZNF479Q96JC4 524 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 SMIM2Q9BVW6 85 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 NHP2Q9NX24 153 aaKnown RBP4.06□□□□□ -1.76
CDH8-206ENST00000580044 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
CDH8-206ENST00000580044 IGKV2D-26A0A0A0MRZ7 120 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 IGHV1-69DA0A0B4J2H0 117 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 IGHV7-4-1A0A0J9YVY3 117 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 CENPVL3A0A0U1RRI6 287 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 A0A1B0GWB2 263 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 A0A1W2PRD5 423 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 A0A1W2PRF3 423 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 A0A1W2PRM7 423 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 IGLL5B9A064 214 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 TMEM238C9JI98 176 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 LYNX1G3V0Z9 82 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 NDUFS8O00217 210 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 OVOL1O14753 267 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 CIDEAO60543 219 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 LYNX1P0DP58 116 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 UBE2E1P51965 193 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 FXYD2P54710 66 aa4.05□□□□□ -1.76
CDH8-206ENST00000580044 DLX1P56177 255 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms