RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 FOXA2Q9Y261 457 aaPredicted RBP2.58□□□□□ -2
CDH19-204ENST00000579658 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
CDH19-204ENST00000579658 TRAV41A0A0B4J266 112 aa2.57□□□□□ -2
CDH19-204ENST00000579658 UPK2O00526 184 aa2.57□□□□□ -2
CDH19-204ENST00000579658 MT-CO2P00403 227 aa2.57□□□□□ -2
CDH19-204ENST00000579658 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
CDH19-204ENST00000579658 IGF1P05019 195 aa2.57□□□□□ -2
CDH19-204ENST00000579658 CRISP2P16562 243 aa2.57□□□□□ -2
CDH19-204ENST00000579658 GCHFRP30047 84 aa2.57□□□□□ -2
CDH19-204ENST00000579658 KIR2DS2P43631 304 aa2.57□□□□□ -2
CDH19-204ENST00000579658 LGALS7P47929 136 aa2.57□□□□□ -2
CDH19-204ENST00000579658 ATP5IP56385 69 aaPredicted RBP2.57□□□□□ -2
CDH19-204ENST00000579658 TPPP2P59282 170 aa2.57□□□□□ -2
CDH19-204ENST00000579658 RHOBP62745 196 aa2.57□□□□□ -2
CDH19-204ENST00000579658 POU2AF1Q16633 256 aa2.57□□□□□ -2
CDH19-204ENST00000579658 DEFB136Q30KP8 78 aa2.57□□□□□ -2
CDH19-204ENST00000579658 VMA21Q3ZAQ7 101 aa2.57□□□□□ -2
CDH19-204ENST00000579658 COX19Q49B96 90 aa2.57□□□□□ -2
CDH19-204ENST00000579658 MIC13Q5XKP0 118 aa2.57□□□□□ -2
CDH19-204ENST00000579658 ZNF562Q6V9R5 426 aa2.57□□□□□ -2
CDH19-204ENST00000579658 Q6ZWC4 215 aa2.57□□□□□ -2
CDH19-204ENST00000579658 SMIM20Q8N5G0 67 aa2.57□□□□□ -2
CDH19-204ENST00000579658 TEX45Q8NA69 505 aa2.57□□□□□ -2
CDH19-204ENST00000579658 OR10W1Q8NGF6 305 aa2.57□□□□□ -2
CDH19-204ENST00000579658 OR4S2Q8NH73 311 aa2.57□□□□□ -2
CDH19-204ENST00000579658 OSR1Q8TAX0 266 aaPredicted RBP2.57□□□□□ -2
CDH19-204ENST00000579658 CMTM2Q8TAZ6 248 aa2.57□□□□□ -2
CDH19-204ENST00000579658 TMEM167AQ8TBQ9 72 aa2.57□□□□□ -2
CDH19-204ENST00000579658 GRAMD2BQ96HH9 432 aa2.57□□□□□ -2
CDH19-204ENST00000579658 RNF5Q99942 180 aa2.57□□□□□ -2
CDH19-204ENST00000579658 MIEN1Q9BRT3 115 aa2.57□□□□□ -2
CDH19-204ENST00000579658 ATG101Q9BSB4 218 aa2.57□□□□□ -2
CDH19-204ENST00000579658 GNB4Q9HAV0 340 aa2.57□□□□□ -2
CDH19-204ENST00000579658 TMEM14BQ9NUH8 114 aa2.57□□□□□ -2
CDH19-204ENST00000579658 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
CDH19-204ENST00000579658 S4R3C0 116 aa2.57□□□□□ -2
CDH19-204ENST00000579658 V9GYV3 84 aa2.57□□□□□ -2
CDH19-204ENST00000579658 C15orf61A6NNL5 157 aa2.57□□□□□ -2
CDH19-204ENST00000579658 NDUFB8O95169 186 aa2.57□□□□□ -2
CDH19-204ENST00000579658 IGHV3-11P01762 117 aa2.57□□□□□ -2
CDH19-204ENST00000579658 MT-ND6P03923 174 aa2.57□□□□□ -2
CDH19-204ENST00000579658 GPX1P07203 203 aa2.57□□□□□ -2
CDH19-204ENST00000579658 LINC00869P0C866 280 aa2.57□□□□□ -2
CDH19-204ENST00000579658 IGHV4-30-4P0DP06 118 aa2.57□□□□□ -2
CDH19-204ENST00000579658 HSPE1P61604 102 aaKnown RBP2.57□□□□□ -2
CDH19-204ENST00000579658 ZNF90Q03938 601 aa2.57□□□□□ -2
CDH19-204ENST00000579658 RAB31Q13636 194 aa2.57□□□□□ -2
CDH19-204ENST00000579658 TDRG1Q3Y452 100 aa2.57□□□□□ -2
CDH19-204ENST00000579658 OR10J3Q5JRS4 329 aa2.57□□□□□ -2
CDH19-204ENST00000579658 C11orf45Q8TAV5 145 aa2.57□□□□□ -2
CDH19-204ENST00000579658 SRSF12Q8WXF0 261 aaKnown RBP2.57□□□□□ -2
CDH19-204ENST00000579658 ARPC1AQ92747 370 aa2.57□□□□□ -2
CDH19-204ENST00000579658 CSTL1Q9H114 145 aa2.57□□□□□ -2
CDH19-204ENST00000579658 OSTCQ9NRP0 149 aa2.57□□□□□ -2
CDH19-204ENST00000579658 A0A087X0K7 114 aa2.56□□□□□ -2
CDH19-204ENST00000579658 IGHV3-21A0A0B4J1V1 117 aa2.56□□□□□ -2
CDH19-204ENST00000579658 TEX50A0A1B0GTY4 177 aa2.56□□□□□ -2
CDH19-204ENST00000579658 GRIFINA4D1Z8 144 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ISLRO14498 428 aa2.56□□□□□ -2
CDH19-204ENST00000579658 SERF1AO75920 110 aa2.56□□□□□ -2
CDH19-204ENST00000579658 IGHV3-23P01764 117 aa2.56□□□□□ -2
CDH19-204ENST00000579658 IGHG4P01861 327 aa2.56□□□□□ -2
CDH19-204ENST00000579658 CBLN1P23435 193 aa2.56□□□□□ -2
CDH19-204ENST00000579658 PSMB8P28062 276 aa2.56□□□□□ -2
CDH19-204ENST00000579658 CTRLP40313 264 aa2.56□□□□□ -2
CDH19-204ENST00000579658 RPL27AP46776 148 aaKnown RBP2.56□□□□□ -2
CDH19-204ENST00000579658 RAB9AP51151 201 aa2.56□□□□□ -2
CDH19-204ENST00000579658 CRIP2P52943 208 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 RPL19P84098 196 aaKnown RBP2.56□□□□□ -2
CDH19-204ENST00000579658 UBE2V1Q13404 147 aa2.56□□□□□ -2
CDH19-204ENST00000579658 RPEL1Q2QD12 228 aa2.56□□□□□ -2
CDH19-204ENST00000579658 CEMP1Q6PRD7 247 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 MMD2Q8IY49 270 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF491Q8N8L2 437 aa2.56□□□□□ -2
CDH19-204ENST00000579658 Q8N976 141 aa2.56□□□□□ -2
CDH19-204ENST00000579658 UHRF2Q96PU4 802 aa2.56□□□□□ -2
CDH19-204ENST00000579658 TMEM208Q9BTX3 173 aa2.56□□□□□ -2
CDH19-204ENST00000579658 TMEM167BQ9NRX6 74 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF355PQ9NSJ1 428 aa2.56□□□□□ -2
CDH19-204ENST00000579658 BET1LQ9NYM9 111 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF257Q9Y2Q1 563 aa2.56□□□□□ -2
CDH19-204ENST00000579658 A0A1W2PRE2 83 aa2.56□□□□□ -2
CDH19-204ENST00000579658 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF705FA8MVS1 300 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 INS-IGF2F8WCM5 200 aa2.56□□□□□ -2
CDH19-204ENST00000579658 SLC17A3O00476 420 aa2.56□□□□□ -2
CDH19-204ENST00000579658 DLEU1O43261 78 aa2.56□□□□□ -2
CDH19-204ENST00000579658 CDK2AP2O75956 126 aa2.56□□□□□ -2
CDH19-204ENST00000579658 IGLV2-8P01709 118 aa2.56□□□□□ -2
CDH19-204ENST00000579658 TRBV12-3P01733 135 aa2.56□□□□□ -2
CDH19-204ENST00000579658 OR5G3P0C626 314 aa2.56□□□□□ -2
CDH19-204ENST00000579658 LINC00614P0C842 121 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF705DP0CH99 300 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF705BP0CI00 300 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 ZNF25P17030 456 aaPredicted RBP2.56□□□□□ -2
CDH19-204ENST00000579658 NPY1RP25929 384 aa2.56□□□□□ -2
CDH19-204ENST00000579658 MFAP2P55001 183 aa2.56□□□□□ -2
CDH19-204ENST00000579658 ERVK-16P61578 105 aa2.56□□□□□ -2
CDH19-204ENST00000579658 RPL8P62917 257 aaKnown RBP2.56□□□□□ -2
CDH19-204ENST00000579658 WT1-ASQ06250 92 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms