RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-209	ENST00000578663	GCHFR	P30047	84 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	ID1	P41134	155 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PSMB3	P49720	205 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	EIF5AL1	Q6IS14	154 aa	Known RBP	4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PQLC2	Q6ZP29	291 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	IQCF2	Q8IXL9	164 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	LINC00052	Q96N35	136 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	UPK3B	Q9BT76	320 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	TMPRSS5	Q9H3S3	457 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	GOLT1B	Q9Y3E0	138 aa		4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.99	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663		F6UB75	175 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663		M0R3E3	92 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	EREG	O14944	169 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	CXorf1	O96002	111 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	SMR3B	P02814	79 aa	Predicted RBP	4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	RAB5C	P51148	216 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PDE6H	Q13956	83 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	ICAM4	Q14773	271 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PSG3	Q16557	428 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	GUK1	Q16774	197 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	RRN3P1	Q2M238	152 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	LELP1	Q5T871	98 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	GDF5OS	Q5U4N7	250 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	SAMD13	Q5VXD3	122 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	DPPA3	Q6W0C5	159 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	EXOC3-AS1	Q8N2X6	119 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	SUN5	Q8TC36	379 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	LRRC20	Q8TCA0	184 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	SFT2D1	Q8WV19	159 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	MBD3L1	Q8WWY6	194 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	SLC50A1	Q9BRV3	221 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663		Q9H8V8	135 aa		4.98	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	IGHV3OR16-12	A0A075B7B8	117 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PRAC2	D3DTV9	90 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	ZNF253	O75346	499 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	NUDT3	O95989	172 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	H2AFB1	P0C5Y9	115 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	UBE2G2	P60604	165 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	ERVFC1-1	P60608	527 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	RAN	P62826	216 aa	Known RBP	4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	CCL20	P78556	96 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663		Q6ZRN7	208 aa	Predicted RBP	4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	ZNF738	Q8NE65	137 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	PCNP	Q8WW12	178 aa	Known RBP	4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	RPUSD4	Q96CM3	377 aa	Known RBP	4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663	TMEM167B	Q9NRX6	74 aa		4.97	□□□□□ -1.61
CDK5RAP3-209	ENST00000578663		A0A0J9YX75	114 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	GGTLC3	B5MD39	225 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	IGKV3-20	P01619	116 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	KRTAP10-1	P60331	282 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	PSG9	Q00887	426 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	TEX261	Q6UWH6	196 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	FOXI2	Q6ZQN5	318 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	C1orf158	Q8N1D5	194 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	ZNF680	Q8NEM1	530 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	OR8A1	Q8NGG7	326 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	SAV1	Q9H4B6	383 aa	Predicted RBP	4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	AAMDC	Q9H7C9	122 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	OTOR	Q9NRC9	128 aa		4.96	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	TRAV1-1	A0A0B4J248	108 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663		A0A1W2PRE2	83 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	PGP	A6NDG6	321 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	FAM74A7	A6NL05	159 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663		F5H768	121 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	PAGE4	O60829	102 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	IGKV2D-40	P01614	121 aa	Predicted RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	ATP5G1	P05496	136 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	TSPO	P30536	169 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	ATP5G3	P48201	142 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	CNN1	P51911	297 aa	Known RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	LINC00315	P59091	139 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	GNG5	P63218	68 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	IFITM2	Q01629	132 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	HIST1H1A	Q02539	215 aa	Predicted RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	ERCC8	Q13216	396 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	EBLN2	Q6P2I7	272 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	OR4B1	Q8NGF8	309 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	MRPL53	Q96EL3	112 aa	Known RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	TMEM70	Q9BUB7	260 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	GNG13	Q9P2W3	67 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	RPH3AL	Q9UNE2	315 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	PRELID1	Q9Y255	219 aa		4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	MRPS16	Q9Y3D3	137 aa	Known RBP	4.95	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663		A8MTW9	85 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	DIRC3	C9JPN6	131 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	NPIPB6	E9PJ23	425 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	GAS8-AS1	O95177	125 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	IFNA7	P01567	189 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	SLC25A5	P05141	298 aa	Known RBP	4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	FXYD7	P58549	80 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	SUMO1	P63165	101 aa	Known RBP	4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	BLOC1S1	P78537	153 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	AMTN	Q6UX39	209 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	VGLL1	Q99990	258 aa		4.94	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	CBY3	A6NI87	242 aa		4.93	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	TEX46	H3BTG2	121 aa		4.93	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	DUSP14	O95147	198 aa	Known RBP	4.93	□□□□□ -1.62
CDK5RAP3-209	ENST00000578663	NMB	P08949	121 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms