RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		Q6ZSN1	163 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	EIF4E3	Q8N5X7	224 aa	Known RBP	2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR10J6P	Q8NGY7	276 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BLNK	Q8WV28	456 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	RASL10A	Q92737	203 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LINC00477	Q96M19	166 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	WDR61	Q9GZS3	305 aa	Known RBP	2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BOLA1	Q9Y3E2	137 aa		2.98	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IGHV1OR15-1	A0A075B7D0	117 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TRAV8-1	A0A0A6YYK1	113 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IGHV3-16	A0A0C4DH30	117 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	C5orf51	A6NDU8	294 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CCDC160	A6NGH7	325 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	FAM25E	A8MYX2	175 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DIRC3	C9JPN6	131 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329		K7EQD1	137 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	SIVA1	O15304	175 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	NMB	P08949	121 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LINC00694	P0DN24	101 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	S100A11	P31949	105 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	BAX	Q07812	192 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PDE6H	Q13956	83 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	CLINT1	Q14677	625 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	TDRG1	Q3Y452	100 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329		Q5BKY6	102 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MUC21	Q5SSG8	566 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329		Q6AWC8	147 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	IQCF2	Q8IXL9	164 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR10G4	Q8NGN3	311 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	OR5C1	Q8NGR4	320 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	LRRC20	Q8TCA0	184 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	DNAJC30	Q96LL9	226 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	MRPL32	Q9BYC8	188 aa	Known RBP	2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	PPP1R14D	Q9NXH3	145 aa		2.97	□□□□□ -1.93
PPP4R1-209	ENST00000578329	UBR4	Q5T4S7	5183 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PKHD1L1	Q86WI1	4243 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TRBV7-9	A0A0J9YWB2	115 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		A6NHS1	94 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	SNURFL	B1AK76	121 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		G3V3Q6	166 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		L7N2F9	121 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PAX4	O43316	350 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	NOL3	O60936	208 aa	Known RBP	2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	MPDU1	O75352	247 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	SMR3B	P02814	79 aa	Predicted RBP	2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	GPX1	P07203	203 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	BCAP31	P51572	246 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	ZNF138	P52744	262 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	S100A10	P60903	97 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	RAN	P62826	216 aa	Known RBP	2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	VAMP2	P63027	116 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	GNG5	P63218	68 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		Q5VSD8	79 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	UFSP1	Q6NVU6	142 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		Q6ZRG5	221 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329		Q6ZSA8	131 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TMEM75	Q8N9X5	138 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	ZNF680	Q8NEM1	530 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	OR1L4	Q8NGR5	311 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	SUN5	Q8TC36	379 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PFDN5	Q99471	154 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	OR51M1	Q9H341	326 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	GPN1	Q9HCN4	374 aa	Predicted RBP	2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PRO0255	Q9UI72	69 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	HHLA3	Q9XRX5	114 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PRELID1	Q9Y255	219 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	FAT3	Q8TDW7	4589 aa		2.96	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TRGV2	A0A075B6R0	118 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	RBAKDN	A6NC62	111 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329		E5RGE8	158 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329		F6UZH7	168 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	MPC2	O95563	127 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TYMS	P04818	313 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	RNASE3	P12724	160 aa	Known RBP	2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	GYPE	P15421	78 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	GATA1	P15976	413 aa	Predicted RBP	2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	RAB2A	P61019	212 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	ZNF726P1	Q15940	193 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	ATP6V1F	Q16864	119 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TMEM183B	Q1AE95	376 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	CNPY1	Q3B7I2	92 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	LRRC37A5P	Q49AS3	106 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TTC32	Q5I0X7	151 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	CCDC28A	Q8IWP9	274 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TMEM183A	Q8IXX5	376 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	NTN5	Q8WTR8	489 aa	Predicted RBP	2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PPP1R1C	Q8WVI7	109 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	SGK494	Q96LW2	274 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	C9orf85	Q96MD7	179 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	MARVELD1	Q9BSK0	173 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PAXX	Q9BUH6	204 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	CCDC32	Q9BV29	185 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	NMES1	Q9C002	83 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	HSPB11	Q9Y547	144 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	TIMM9	Q9Y5J7	89 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	ICOS	Q9Y6W8	199 aa		2.95	□□□□□ -1.94
PPP4R1-209	ENST00000578329	IGKV3D-20	A0A0C4DH25	116 aa		2.94	□□□□□ -1.94
PPP4R1-209	ENST00000578329	FAM240B	A0A1B0GVZ2	78 aa		2.94	□□□□□ -1.94
PPP4R1-209	ENST00000578329	PGPEP1L	A6NFU8	196 aa		2.94	□□□□□ -1.94
PPP4R1-209	ENST00000578329	CENPX	A8MT69	81 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms