RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 C6orf52Q5T4I8 152 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 SAMD13Q5VXD3 122 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 Q6ZQY7 126 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 C5orf17Q8NAS9 161 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 OR4B1Q8NGF8 309 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 OR5AK2Q8NH90 309 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 SMR3AQ99954 134 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 CCDC32Q9BV29 185 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 MRPL40Q9NQ50 206 aaKnown RBP0.17□□□□□ -2.38
TOP2A-202ENST00000577541 CPDO75976 1380 aa0.17□□□□□ -2.38
TOP2A-202ENST00000577541 A2MP01023 1474 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 ARAP1Q96P48 1450 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 SYNJ1O43426 1573 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 ARHGAP31Q2M1Z3 1444 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 ANK2Q01484 3957 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 E7EQ34 232 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 EDF1O60869 148 aaKnown RBP0.16□□□□□ -2.38
TOP2A-202ENST00000577541 IL7P13232 177 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 TPT1P13693 172 aaKnown RBP0.16□□□□□ -2.38
TOP2A-202ENST00000577541 NDUFA6P56556 154 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 MRPS36P82909 103 aaKnown RBP0.16□□□□□ -2.38
TOP2A-202ENST00000577541 FXYD3Q14802 87 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 OR8B8Q15620 311 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 GLYATL3Q5SZD4 288 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 CROCCP2Q86T23 111 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 C5orf56Q8N8D9 126 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 OTOSQ8NHW6 89 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 ISOC1Q96CN7 298 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 MCEEQ96PE7 176 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 CIB3Q96Q77 187 aaPredicted RBP0.16□□□□□ -2.38
TOP2A-202ENST00000577541 DDA1Q9BW61 102 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 TCEAL2Q9H3H9 227 aaPredicted RBP0.16□□□□□ -2.38
TOP2A-202ENST00000577541 ATPIF1Q9UII2 106 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 LAMTOR2Q9Y2Q5 125 aa0.16□□□□□ -2.38
TOP2A-202ENST00000577541 XIRP1Q702N8 1843 aaKnown RBP0.15□□□□□ -2.38
TOP2A-202ENST00000577541 NEBP20929 6669 aa0.15□□□□□ -2.38
TOP2A-202ENST00000577541 OVOS2A0A0G2JMS6 1433 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 IGHV3-30P01768 117 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 HBDP02042 147 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 CD3DP04234 171 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 SAA1P0DJI8 122 aaPredicted RBP0.15□□□□□ -2.39
TOP2A-202ENST00000577541 IGHV3-30-5P0DP03 117 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 NEFHP12036 1026 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 RPL22P35268 128 aaKnown RBP0.15□□□□□ -2.39
TOP2A-202ENST00000577541 ZNF137PP52743 207 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 SNRPD3P62318 126 aaKnown RBP0.15□□□□□ -2.39
TOP2A-202ENST00000577541 TFAMQ00059 246 aaKnown RBP0.15□□□□□ -2.39
TOP2A-202ENST00000577541 ZNF56Q15929 161 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 IQCJQ1A5X6 159 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 IZUMO2Q6UXV1 221 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 LINC00299Q6ZSB3 139 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM229BQ8NBD8 167 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 SELENOSQ9BQE4 189 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 CENPHQ9H3R5 247 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 TANC2Q9HCD6 1990 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 MED23Q9ULK4 1368 aa0.15□□□□□ -2.39
TOP2A-202ENST00000577541 ZCCHC6Q5VYS8 1495 aaKnown RBP0.15□□□□□ -2.39
TOP2A-202ENST00000577541 KNTC1P50748 2209 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 PTPRGP23470 1445 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 TRPM7Q96QT4 1865 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 LOC107986453A0A1B0GWG9 222 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 GNG14A0A1W2PPG7 69 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 J3KT08 172 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 S100GP29377 79 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 SPINK9Q5DT21 86 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 XAF1Q6GPH4 301 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 SPATA8Q6RVD6 105 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 LYPD5Q6UWN5 251 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 TOMM20LQ6UXN7 152 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 SMIM15Q7Z3B0 74 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 TCTEX1D1Q8N7M0 179 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 OR9Q1Q8NGQ5 310 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 LXNQ9BS40 222 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 LAMTOR3Q9UHA4 124 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 GINS2Q9Y248 185 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 V9GYQ6 96 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 PTPRMP28827 1452 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 LOC285556D6RIA3 1793 aa0.14□□□□□ -2.39
TOP2A-202ENST00000577541 BDP1A6H8Y1 2624 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 TRAV36DV7A0A075B6V5 113 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 A0A1W2PPB8 328 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 KIR3DP1A8MWS1 328 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 M0R129 80 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 IGF2P01344 180 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 GTF2A1P52655 376 aaPredicted RBP0.13□□□□□ -2.39
TOP2A-202ENST00000577541 DEFB132Q7Z7B7 95 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 C10orf111Q8N326 155 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 TMEM35BQ8NCS4 154 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 OR5A2Q8NGI9 324 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 MRPL36Q9P0J6 103 aaKnown RBP0.13□□□□□ -2.39
TOP2A-202ENST00000577541 HSPB8Q9UJY1 196 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 BOKQ9UMX3 212 aaPredicted RBP0.13□□□□□ -2.39
TOP2A-202ENST00000577541 CDK12Q9NYV4 1490 aaPredicted RBP0.13□□□□□ -2.39
TOP2A-202ENST00000577541 KIDINS220Q9ULH0 1771 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 ANKRD17O75179 2603 aaKnown RBP0.13□□□□□ -2.39
TOP2A-202ENST00000577541 SPTBP11277 2137 aa0.13□□□□□ -2.39
TOP2A-202ENST00000577541 RREB1Q92766 1687 aa0.12□□□□□ -2.39
TOP2A-202ENST00000577541 PIEZO1Q92508 2521 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms