RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	PIP	P12273	146 aa	Predicted RBP	3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SNRPD3	P62318	126 aa	Known RBP	3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MIC13	Q5XKP0	118 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SPATA12	Q7Z6I5	190 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	C5orf38	Q86SI9	138 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00337	Q8N6G1	96 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SLC25A29	Q8N8R3	303 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DCANP1	Q8TF63	244 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	FGF13	Q92913	245 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LSM10	Q969L4	123 aa	Known RBP	3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00167	Q96N53	147 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SCRT1	Q9BWW7	348 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MANBAL	Q9NQG1	85 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RGPD1	P0DJD0	1748 aa		3.9	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SCN8A	Q9UQD0	1980 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TMEM223	A0PJW6	202 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZNF736	B4DX44	427 aa	Predicted RBP	3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909		M0R129	80 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	NDUFC1	O43677	76 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	BCE1	O60756	84 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CD7	P09564	240 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	COX8A	P10176	69 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZNF80	P51504	273 aa	Predicted RBP	3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DYNLT3	P51808	116 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	UBE2G1	P62253	170 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RBMY1F	Q15415	496 aa	Known RBP	3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LAIR2	Q6ISS4	152 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909		Q6ZR03	302 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00596	Q86U02	117 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MDP1	Q86V88	176 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	UBALD1	Q8TB05	177 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	AQP3	Q92482	292 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RMI2	Q96E14	147 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	GABARAPL1	Q9H0R8	117 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LSM2	Q9Y333	95 aa	Known RBP	3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TRAPPC1	Q9Y5R8	145 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MROH2A	A6NES4	1674 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PLXNA4	Q9HCM2	1894 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TRPM2	O94759	1503 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ARHGAP21	Q5T5U3	1957 aa		3.89	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TOP2B	Q02880	1626 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909		C9JQL5	133 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TMEM256-PLSCR3	K7ERE1	68 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CISD3	P0C7P0	127 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CFAP126	Q5VTH2	177 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SCX	Q7RTU7	201 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SERP2	Q8N6R1	65 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	STAG3L4	Q8TBR4	150 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZC2HC1A	Q96GY0	325 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TMEM243	Q9BU79	118 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	HIGD1B	Q9P298	99 aa		3.88	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MICAL3	Q7RTP6	2002 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RGPD8	O14715	1765 aa	Predicted RBP	3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	KDM3B	Q7LBC6	1761 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RGPD5	Q99666	1765 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TRAV17	A0A0B4J275	112 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MDFIC2	A0A1B0GVS7	189 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PRM2	P04554	102 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CXCL8	P10145	99 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PCBD1	P61457	104 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	SSBP1	Q04837	148 aa	Known RBP	3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZNF791	Q3KP31	576 aa	Predicted RBP	3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909		Q5W150	140 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	EBLN2	Q6P2I7	272 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	BAGE3	Q86Y29	109 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	BAGE2	Q86Y30	109 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LY96	Q9Y6Y9	160 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TICRR	Q7Z2Z1	1910 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	THSD7A	Q9UPZ6	1657 aa		3.87	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RGPD3	A6NKT7	1758 aa	Predicted RBP	3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ADGRB1	O14514	1584 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ARHGEF5	Q12774	1597 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	C2orf16	Q68DN1	1984 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TRAV14DV4	A0A0A6YYC5	116 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909		K7EM74	188 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	C3orf79	P0CE67	100 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	CKS2	P33552	79 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00313	P59037	77 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ASB16-AS1	Q495Z4	193 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TMEM170B	Q5T4T1	132 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	C10orf105	Q8TEF2	133 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZNF414	Q96IQ9	312 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	ZNF714	Q96N38	554 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	OR8B2	Q96RD0	313 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DSCR8	Q96T75	97 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	NMES1	Q9C002	83 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	FGF23	Q9GZV9	251 aa	Predicted RBP	3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	TAS2R4	Q9NYW5	299 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	LINC00588	Q9Y4M8	146 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	GCC2	Q8IWJ2	1684 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	PREX1	Q8TCU6	1659 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	RGPD2	P0DJD1	1756 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DOCK2	Q92608	1830 aa		3.86	□□□□□ -1.79
TOM1L1-222	ENST00000575909	HEATR5A	Q86XA9	2040 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	MAST1	Q9Y2H9	1570 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	DYSF	O75923	2080 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	USP54	Q70EL1	1684 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909		A0A0D9SEW6	157 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909		C9JCJ5	164 aa		3.85	□□□□□ -1.79
TOM1L1-222	ENST00000575909	FUT5	Q11128	374 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms