RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 FXYD6-FXYD2A0A087WZ82 144 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 IGLV5-52A0A0A0MRZ9 124 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 KANTRA0A1W2PQU2 76 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 RNF222A6NCQ9 220 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 ZNF705GA8MUZ8 300 aaPredicted RBP4.05□□□□□ -1.76
SMG6-219ENST00000575663 F6UZH7 168 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 K7EPK0 472 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 SYNGR2O43760 224 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 OXTP01178 125 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 IGKV1-39P01597 117 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 IGKV1-5P01602 117 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 IGKV1D-39P04432 117 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 IL4P05112 153 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 RPL12P30050 165 aaKnown RBP4.05□□□□□ -1.76
SMG6-219ENST00000575663 S100A7P31151 101 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 PTTG1IPP53801 180 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 HSPE1P61604 102 aaKnown RBP4.05□□□□□ -1.76
SMG6-219ENST00000575663 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 OR5I1Q13606 314 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 ZNF266Q14584 549 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 TIGITQ495A1 244 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 AKR1C8PQ5T2L2 129 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 FAM78BQ5VT40 261 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 ATRAIDQ6UW56 229 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 ERASQ7Z444 233 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 BAP18Q8IXM2 172 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 SVBPQ8N300 66 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 OR11H4Q8NGC9 324 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 OR1S2Q8NGQ3 325 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 OR1S1Q8NH92 325 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 PTH2Q96A98 100 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 GPR146Q96CH1 333 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 SPANXA1Q9NS26 97 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 LYRM2Q9NU23 88 aaPredicted RBP4.05□□□□□ -1.76
SMG6-219ENST00000575663 ZFP30Q9Y2G7 519 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 U3KQE9 123 aa4.05□□□□□ -1.76
SMG6-219ENST00000575663 LRP1Q07954 4544 aaKnown RBP4.04□□□□□ -1.76
SMG6-219ENST00000575663 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 BORCS7-ASMTA0A0B4J1R7 106 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 A0A0J9YX75 114 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 A0A0J9YY99 117 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 FNDC10F2Z333 226 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 H0YIZ8 118 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 H3BNG1 76 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 SIVA1O15304 175 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 BCL2L11O43521 198 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 BUB3O43684 328 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 IGKV1-17P01599 117 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 APOC3P02656 99 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 FGF7P21781 194 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 SULT1A1P50225 295 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 DEFB1P60022 68 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 SEC61GP60059 68 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 HBG1P69891 147 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 HBG2P69892 147 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 OPCMLQ14982 345 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 ESRGQ1W209 222 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 Q5BKY6 102 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 SPINK9Q5DT21 86 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 TMUB2Q71RG4 321 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 LINC00528Q8N1L1 170 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 NTN5Q8WTR8 489 aaPredicted RBP4.04□□□□□ -1.76
SMG6-219ENST00000575663 C16orf74Q96GX8 76 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 RSG1Q9BU20 258 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 ARL6Q9H0F7 186 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 C11orf1Q9H5F2 150 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 DNAJC4Q9NNZ3 241 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 ENY2Q9NPA8 101 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 RPRMQ9NS64 109 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 DOK5Q9P104 306 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 CACNG5Q9UF02 275 aa4.04□□□□□ -1.76
SMG6-219ENST00000575663 TIMM8BQ9Y5J9 83 aaPredicted RBP4.04□□□□□ -1.76
SMG6-219ENST00000575663 TRAV9-2A0A087WT02 112 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 TGIF2-C20orf24A0A0A6YYL0 155 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 NPIPB6E9PJ23 425 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 SLC17A3O00476 420 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 ISLRO14498 428 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 PDE6DO43924 150 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 IGLC1P0CG04 106 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 TPT1P13693 172 aaKnown RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 CXCL2P19875 107 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 OR10J1P30954 320 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 S100A10P60903 97 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 CKS1BP61024 79 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 YPEL3P61236 119 aaPredicted RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 LRRC37A5PQ49AS3 106 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 TMEM14EPQ6UXP3 125 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 TMEM256Q8N2U0 113 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 TMEM252Q8N6L7 170 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 ORAOV1Q8WV07 137 aa4.03□□□□□ -1.76
SMG6-219ENST00000575663 RPUSD4Q96CM3 377 aaKnown RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 SSBP4Q9BWG4 385 aaPredicted RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 MRPL36Q9P0J6 103 aaKnown RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 RCL1Q9Y2P8 373 aaKnown RBP4.03□□□□□ -1.76
SMG6-219ENST00000575663 PLAC8L1A1L4L8 177 aa4.02□□□□□ -1.77
SMG6-219ENST00000575663 FAM74A7A6NL05 159 aa4.02□□□□□ -1.77
SMG6-219ENST00000575663 UMAD1C9J7I0 102 aa4.02□□□□□ -1.77
SMG6-219ENST00000575663 F6UB75 175 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms