RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 OR10G4Q8NGN3 311 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 OR10G9Q8NGN4 311 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 OR10G7Q8NGN6 311 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 ARPC5LQ9BPX5 153 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 OTORQ9NRC9 128 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 HERC2O95714 4834 aa18.11■□□□□ 0.49
NPLOC4-215ENST00000574095 NBDYA0A0U1RRE5 68 aa18.1■□□□□ 0.49
NPLOC4-215ENST00000574095 Q5BKY6 102 aa18.1■□□□□ 0.49
NPLOC4-215ENST00000574095 IBA57Q5T440 356 aaKnown RBP18.1■□□□□ 0.49
NPLOC4-215ENST00000574095 RPH3ALQ9UNE2 315 aa18.1■□□□□ 0.49
NPLOC4-215ENST00000574095 PKHD1P08F94 4074 aa18.1■□□□□ 0.49
NPLOC4-215ENST00000574095 ZNF266Q14584 549 aa18.09■□□□□ 0.49
NPLOC4-215ENST00000574095 MUC21Q5SSG8 566 aa18.09■□□□□ 0.49
NPLOC4-215ENST00000574095 PQLC2Q6ZP29 291 aa18.09■□□□□ 0.49
NPLOC4-215ENST00000574095 HSD17B11Q8NBQ5 300 aa18.09■□□□□ 0.49
NPLOC4-215ENST00000574095 C18orf15Q96N68 181 aa18.09■□□□□ 0.49
NPLOC4-215ENST00000574095 CMTM2Q8TAZ6 248 aa18.08■□□□□ 0.48
NPLOC4-215ENST00000574095 AQP10Q96PS8 301 aa18.08■□□□□ 0.48
NPLOC4-215ENST00000574095 DNAH11Q96DT5 4516 aa18.08■□□□□ 0.48
NPLOC4-215ENST00000574095 H3BNG1 76 aa18.07■□□□□ 0.48
NPLOC4-215ENST00000574095 ESRGQ1W209 222 aa18.07■□□□□ 0.48
NPLOC4-215ENST00000574095 VSIG2Q96IQ7 327 aa18.07■□□□□ 0.48
NPLOC4-215ENST00000574095 MRPL16Q9NX20 251 aaKnown RBP18.07■□□□□ 0.48
NPLOC4-215ENST00000574095 KIAA1109Q2LD37 5005 aa18.06■□□□□ 0.48
NPLOC4-215ENST00000574095 FAM74A1Q5RGS3 127 aa18.06■□□□□ 0.48
NPLOC4-215ENST00000574095 Q9H8V8 135 aa18.06■□□□□ 0.48
NPLOC4-215ENST00000574095 LENEPQ9Y5L5 61 aa18.06■□□□□ 0.48
NPLOC4-215ENST00000574095 IGHV3-53P01767 116 aa18.05■□□□□ 0.48
NPLOC4-215ENST00000574095 ATP6V0CP27449 155 aa18.05■□□□□ 0.48
NPLOC4-215ENST00000574095 CDC34P49427 236 aaPredicted RBP18.05■□□□□ 0.48
NPLOC4-215ENST00000574095 ZNF415Q09FC8 603 aa18.05■□□□□ 0.48
NPLOC4-215ENST00000574095 MUC4Q99102 2169 aa18.05■□□□□ 0.48
NPLOC4-215ENST00000574095 ARL14EPLP0DKL9 152 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 Q6AWC8 147 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 GOLT1AQ6ZVE7 132 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 OR2G3Q8NGZ4 309 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 TMED6Q8WW62 240 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 MDFICQ9P1T7 246 aa18.04■□□□□ 0.48
NPLOC4-215ENST00000574095 A0A096LPF7 62 aa18.03■□□□□ 0.48
NPLOC4-215ENST00000574095 GIPP09681 153 aaPredicted RBP18.03■□□□□ 0.48
NPLOC4-215ENST00000574095 GNG5P63218 68 aa18.03■□□□□ 0.48
NPLOC4-215ENST00000574095 ST6GAL2Q96JF0 529 aa18.03■□□□□ 0.48
NPLOC4-215ENST00000574095 PSMG3Q9BT73 122 aaPredicted RBP18.03■□□□□ 0.48
NPLOC4-215ENST00000574095 STAG3L2P0CL84 134 aa18.02■□□□□ 0.48
NPLOC4-215ENST00000574095 STAG3L3P0CL85 134 aa18.02■□□□□ 0.48
NPLOC4-215ENST00000574095 FAM159AQ6UWV7 190 aa18.02■□□□□ 0.48
NPLOC4-215ENST00000574095 C6orf223Q8N319 242 aa18.02■□□□□ 0.48
NPLOC4-215ENST00000574095 RAB24Q969Q5 203 aa18.02■□□□□ 0.48
NPLOC4-215ENST00000574095 TRAV8-1A0A0A6YYK1 113 aa18.01■□□□□ 0.47
NPLOC4-215ENST00000574095 TMEM183BQ1AE95 376 aa18.01■□□□□ 0.47
NPLOC4-215ENST00000574095 TMEM183AQ8IXX5 376 aa18.01■□□□□ 0.47
NPLOC4-215ENST00000574095 SH3BGRL3Q9H299 93 aa18.01■□□□□ 0.47
NPLOC4-215ENST00000574095 ARL6IP6Q8N6S5 226 aa18■□□□□ 0.47
NPLOC4-215ENST00000574095 TVP23CQ96ET8 276 aa18■□□□□ 0.47
NPLOC4-215ENST00000574095 NAGKQ9UJ70 344 aa18■□□□□ 0.47
NPLOC4-215ENST00000574095 SERF2P84101 59 aa17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 TNP2Q05952 138 aa17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 INO80EQ8NBZ0 244 aaPredicted RBP17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 ASB13Q8WXK3 278 aa17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 SGK494Q96LW2 274 aa17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 UPK3BQ9BT76 320 aa17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 MRPS16Q9Y3D3 137 aaKnown RBP17.99■□□□□ 0.47
NPLOC4-215ENST00000574095 RNF222A6NCQ9 220 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 F6UZH7 168 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 PAX4O43316 350 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 MBP02144 154 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 GCHFRP30047 84 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 TREM1Q9NP99 234 aa17.98■□□□□ 0.47
NPLOC4-215ENST00000574095 TRGV11A0A075B6L2 103 aa17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 FXYD6-FXYD2A0A087WZ82 144 aa17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 GNRH2O43555 120 aa17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 FHL2Q14192 279 aa17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 RPL7L1Q6DKI1 246 aaKnown RBP17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 PRO0255Q9UI72 69 aa17.97■□□□□ 0.47
NPLOC4-215ENST00000574095 SUN5Q8TC36 379 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 C8orf49Q96NF6 230 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 SPXQ9BT56 116 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 KRTAP1-5Q9BYS1 174 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 ACTR3CQ9C0K3 210 aaPredicted RBP17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 TNFSF18Q9UNG2 199 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 HHLA3Q9XRX5 114 aa17.96■□□□□ 0.47
NPLOC4-215ENST00000574095 TRAV21A0A0B4J279 112 aa17.95■□□□□ 0.46
NPLOC4-215ENST00000574095 CRYBA4P53673 196 aa17.95■□□□□ 0.46
NPLOC4-215ENST00000574095 TDRG1Q3Y452 100 aa17.95■□□□□ 0.46
NPLOC4-215ENST00000574095 OR2T35Q8NGX2 323 aa17.95■□□□□ 0.46
NPLOC4-215ENST00000574095 ICOSQ9Y6W8 199 aa17.95■□□□□ 0.46
NPLOC4-215ENST00000574095 SFTA3P0C7M3 94 aa17.94■□□□□ 0.46
NPLOC4-215ENST00000574095 CXorf1O96002 111 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 TCRAP04437 139 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 SUMO1P63165 101 aaKnown RBP17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 SLAQ13239 276 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 RGS21Q2M5E4 152 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 TTC32Q5I0X7 151 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 ZNF575Q86XF7 245 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 C5orf17Q8NAS9 161 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 RASL10AQ92737 203 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 ZNF479Q96JC4 524 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 TMEM167BQ9NRX6 74 aa17.93■□□□□ 0.46
NPLOC4-215ENST00000574095 BORCS7-ASMTA0A0B4J1R7 106 aa17.92■□□□□ 0.46
NPLOC4-215ENST00000574095 TRGV4A0A0C4DH28 118 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms