RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 TRAV12-3A0A0B4J271 114 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 FAM74A7A6NL05 159 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 ZNF705GA8MUZ8 300 aaPredicted RBP7.93□□□□□ -1.14
CHD3-216ENST00000573936 GGTLC3B5MD39 225 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 F6UZH7 168 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 TCRAP04437 139 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 SPART-AS1P0CW21 52 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 RNASE4P34096 147 aaKnown RBP7.93□□□□□ -1.14
CHD3-216ENST00000573936 GNG5P63218 68 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 ZNF493Q6ZR52 646 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 CYB561D1Q8N8Q1 229 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 HIST1H2BAQ96A08 127 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 PYGO2Q9BRQ0 406 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 TCEAL7Q9BRU2 100 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 ATG101Q9BSB4 218 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 GNG13Q9P2W3 67 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 YTHDF2Q9Y5A9 579 aaKnown RBP7.93□□□□□ -1.14
CHD3-216ENST00000573936 FRAS1Q86XX4 4008 aa7.93□□□□□ -1.14
CHD3-216ENST00000573936 PAGE4O60829 102 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 ZNF324O75467 553 aaPredicted RBP7.92□□□□□ -1.14
CHD3-216ENST00000573936 PMS2P11Q13670 270 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 KIR3DS1Q14943 382 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 Q8TAT8 98 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 C16orf74Q96GX8 76 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 MANBALQ9NQG1 85 aa7.92□□□□□ -1.14
CHD3-216ENST00000573936 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 LYRM9A8MSI8 78 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 C11orf94C9JXX5 98 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 IFNA1P01562 189 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 HTN1P15515 57 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 EMP1P54849 157 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 NANOS2P60321 138 aaKnown RBP7.91□□□□□ -1.14
CHD3-216ENST00000573936 BTN1A1Q13410 526 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 TMEM263Q8WUH6 116 aaKnown RBP7.91□□□□□ -1.14
CHD3-216ENST00000573936 TREM1Q9NP99 234 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 PSG8Q9UQ74 426 aa7.91□□□□□ -1.14
CHD3-216ENST00000573936 KLK5Q9Y337 293 aaPredicted RBP7.91□□□□□ -1.14
CHD3-216ENST00000573936 TRAV8-1A0A0A6YYK1 113 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 PEX7O00628 323 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 BCL2P10415 239 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 AZU1P20160 251 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 ATP5G3P48201 142 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 FLI1Q01543 452 aaPredicted RBP7.9□□□□□ -1.14
CHD3-216ENST00000573936 ANXA2RQ3ZCQ2 193 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 SAPCD1Q5SSQ6 148 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 Q6AWC8 147 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
CHD3-216ENST00000573936 EIF4E3Q8N5X7 224 aaKnown RBP7.9□□□□□ -1.14
CHD3-216ENST00000573936 PHLDA1Q8WV24 401 aaPredicted RBP7.9□□□□□ -1.14
CHD3-216ENST00000573936 FAM210AQ96ND0 272 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 DKK2Q9UBU2 259 aa7.9□□□□□ -1.14
CHD3-216ENST00000573936 TIMM8BQ9Y5J9 83 aaPredicted RBP7.9□□□□□ -1.14
CHD3-216ENST00000573936 TRAV10A0A0B4J240 114 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 TRAV21A0A0B4J279 112 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 RBFOX3A6NFN3 312 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 CBY3A6NI87 242 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 S100A9P06702 114 aaKnown RBP7.89□□□□□ -1.15
CHD3-216ENST00000573936 C12orf74Q32Q52 190 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 TOR2AQ5JU69 321 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 ZNF506Q5JVG8 444 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 FAM222AQ5U5X8 452 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 PRNTQ86SH4 94 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 RNASE8Q8TDE3 154 aaKnown RBP7.89□□□□□ -1.15
CHD3-216ENST00000573936 FMC1Q96HJ9 113 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 VAX2Q9UIW0 290 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 CELA1Q9UNI1 258 aa7.89□□□□□ -1.15
CHD3-216ENST00000573936 IGHV1OR15-1A0A075B7D0 117 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 SNURFLB1AK76 121 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 IGLV2-11P01706 119 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 PRM2P04554 102 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 TAGLN2P37802 199 aaKnown RBP7.88□□□□□ -1.15
CHD3-216ENST00000573936 DAD1P61803 113 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 UBE2G1P62253 170 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 MEF2BQ02080 365 aaPredicted RBP7.88□□□□□ -1.15
CHD3-216ENST00000573936 SMUG1Q53HV7 270 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 PRR9Q5T870 116 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 SGK494Q96LW2 274 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 MED9Q9NWA0 146 aa7.88□□□□□ -1.15
CHD3-216ENST00000573936 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 TRBV6-1A0A0K0K1D8 114 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 PLAC8L1A1L4L8 177 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 LINC00862A6NCI5 91 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 AKR1C3P42330 323 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 SRSF3P84103 164 aaKnown RBP7.87□□□□□ -1.15
CHD3-216ENST00000573936 IBA57Q5T440 356 aaKnown RBP7.87□□□□□ -1.15
CHD3-216ENST00000573936 Q6ZTC4 211 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 C2CD4CQ8TF44 421 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 TVP23CQ96ET8 276 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 EIF5A2Q9GZV4 153 aaKnown RBP7.87□□□□□ -1.15
CHD3-216ENST00000573936 ZFP30Q9Y2G7 519 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 KLF12Q9Y4X4 402 aa7.87□□□□□ -1.15
CHD3-216ENST00000573936 DNAH10Q8IVF4 4471 aa7.86□□□□□ -1.15
CHD3-216ENST00000573936 KMT2AQ03164 3969 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 297.1 ms