RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895		A0A0J9YWU9	116 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	CA1	P00915	261 aa	Predicted RBP	10.48	□□□□□ -0.73
ABR-223	ENST00000573895	HLA-DRB4	P13762	266 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	GNG4	P50150	75 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	HIST1H1A	Q02539	215 aa	Predicted RBP	10.48	□□□□□ -0.73
ABR-223	ENST00000573895	ODF3	Q96PU9	254 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	NIPSNAP3B	Q9BS92	247 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	NDFIP1	Q9BT67	221 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	DERL1	Q9BUN8	251 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	BIN3	Q9NQY0	253 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	ZNF492	Q9P255	531 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	NAT8	Q9UHE5	227 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	HLA-DRB4	X5D2U9	266 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895	SACS	Q9NZJ4	4579 aa		10.48	□□□□□ -0.73
ABR-223	ENST00000573895		A8MTW9	85 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895		F6UB75	175 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895		H3BMM0	161 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	LTA	P01374	205 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	ERCC8	Q13216	396 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	CENPW	Q5EE01	88 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	ACTL10	Q5JWF8	245 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	PRNT	Q86SH4	94 aa		10.47	□□□□□ -0.73
ABR-223	ENST00000573895	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.47	□□□□□ -0.73
ABR-223	ENST00000573895	TRAV8-1	A0A0A6YYK1	113 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	LCE6A	A0A183	80 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	GIG44	P09565	113 aa	Predicted RBP	10.46	□□□□□ -0.73
ABR-223	ENST00000573895	ZNF705D	P0CH99	300 aa	Predicted RBP	10.46	□□□□□ -0.73
ABR-223	ENST00000573895	ZNF705B	P0CI00	300 aa	Predicted RBP	10.46	□□□□□ -0.73
ABR-223	ENST00000573895	CT45A10	P0DMU9	189 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	TSPO	P30536	169 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	PNRC1	Q12796	327 aa	Predicted RBP	10.46	□□□□□ -0.73
ABR-223	ENST00000573895	COX8C	Q7Z4L0	72 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895		Q86TA4	180 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	TMEM183A	Q8IXX5	376 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	OR11H2	Q8NH07	326 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	IGF2BP2-AS1	Q96M15	143 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	MLST8	Q9BVC4	326 aa		10.46	□□□□□ -0.73
ABR-223	ENST00000573895	C11orf68	Q9H3H3	251 aa	Known RBP	10.46	□□□□□ -0.73
ABR-223	ENST00000573895	TRBV20OR9-2	A0A075B6H5	130 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	KNCN	A6PVL3	124 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	LEP	P41159	167 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	DEFB1	P60022	68 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	NUTF2	P61970	127 aa	Known RBP	10.45	□□□□□ -0.74
ABR-223	ENST00000573895	GDF5OS	Q5U4N7	250 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	OR4B1	Q8NGF8	309 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	OCC1	Q8TAD7	63 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	TVP23C	Q96ET8	276 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	SGK494	Q96LW2	274 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	SDF2L1	Q9HCN8	221 aa		10.45	□□□□□ -0.74
ABR-223	ENST00000573895	CRISP2	P16562	243 aa		10.44	□□□□□ -0.74
ABR-223	ENST00000573895	S100A1	P23297	94 aa		10.44	□□□□□ -0.74
ABR-223	ENST00000573895	FAM19A4	Q96LR4	140 aa		10.44	□□□□□ -0.74
ABR-223	ENST00000573895	C1QTNF4	Q9BXJ3	329 aa		10.44	□□□□□ -0.74
ABR-223	ENST00000573895	NUPR2	A6NF83	97 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	IGLV2-8	P01709	118 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	AMBP	P02760	352 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	ADCYAP1	P18509	176 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	SMUG1	Q53HV7	270 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	LINC01551	Q86U37	167 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	CSNK1G2-AS1	Q8NCQ2	148 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	DNAH1	Q9P2D7	4330 aa		10.43	□□□□□ -0.74
ABR-223	ENST00000573895	PLEC	Q15149	4684 aa	Known RBP	10.43	□□□□□ -0.74
ABR-223	ENST00000573895		B4DEV8	164 aa		10.42	□□□□□ -0.74
ABR-223	ENST00000573895	GCG	P01275	180 aa		10.42	□□□□□ -0.74
ABR-223	ENST00000573895	PRB4	P10163	310 aa	Predicted RBP	10.42	□□□□□ -0.74
ABR-223	ENST00000573895	RPL23	P62829	140 aa	Known RBP	10.42	□□□□□ -0.74
ABR-223	ENST00000573895	AMTN	Q6UX39	209 aa		10.42	□□□□□ -0.74
ABR-223	ENST00000573895	SVBP	Q8N300	66 aa		10.42	□□□□□ -0.74
ABR-223	ENST00000573895		Q8TAT8	98 aa		10.42	□□□□□ -0.74
ABR-223	ENST00000573895	RYR2	Q92736	4967 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	FABP5P3	A8MUU1	101 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	IGKV3-20	P01619	116 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	APOC3	P02656	99 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	GPX1	P07203	203 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	MGST1	P10620	155 aa	Known RBP	10.41	□□□□□ -0.74
ABR-223	ENST00000573895	MIF	P14174	115 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	CDKN1B	P46527	198 aa		10.41	□□□□□ -0.74
ABR-223	ENST00000573895	CXorf65	A6NEN9	183 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	PGPEP1L	A6NFU8	196 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	KLLN	B2CW77	178 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	ATP6V1G1	O75348	118 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	ADIRF	Q15847	76 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.4	□□□□□ -0.74
ABR-223	ENST00000573895	ZFAND2A	Q8N6M9	145 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895		Q8NAQ8	132 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895	DAZAP1	Q96EP5	407 aa	Known RBP	10.4	□□□□□ -0.74
ABR-223	ENST00000573895	C8orf49	Q96NF6	230 aa		10.4	□□□□□ -0.74
ABR-223	ENST00000573895		K7EN84	100 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	SNAPIN	O95295	136 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	FAM162B	Q5T6X4	162 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	FAM231D	Q6ZW35	169 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	NHLRC2	Q8NBF2	726 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	C11orf45	Q8TAV5	145 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	ISOC2	Q96AB3	205 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	ZC2HC1A	Q96GY0	325 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	KLK5	Q9Y337	293 aa	Predicted RBP	10.39	□□□□□ -0.75
ABR-223	ENST00000573895		X6R8D5	127 aa		10.39	□□□□□ -0.75
ABR-223	ENST00000573895	ALMS1	Q8TCU4	4167 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895	TRAV21	A0A0B4J279	112 aa		10.38	□□□□□ -0.75
ABR-223	ENST00000573895		M0R036	132 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms