RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ATOH7Q8N100 152 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 MAP1AP78559 2803 aaPredicted RBP7.83□□□□□ -1.16
SMG6-213ENST00000573166 LOC389332A0A1B0GUA5 103 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 SPINK13Q1W4C9 94 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 Q6ZS46 218 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 LINC01006Q8NI28 216 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 WDFY3Q8IZQ1 3526 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 C9orf66Q5T8R8 295 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 GPHB5Q86YW7 130 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 C4orf3Q8WVX3 66 aa7.83□□□□□ -1.16
SMG6-213ENST00000573166 KNCNA6PVL3 124 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 CRLF1O75462 422 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 INSP01308 110 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 ZNF664Q8N3J9 261 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 TMEM170AQ8WVE7 144 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 TRGV11A0A075B6L2 103 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 C2orf70A6NJV1 201 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 ADMP35318 185 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 HBBP68871 147 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 SLC25A34Q6PIV7 304 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 C1orf159Q96HA4 380 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 ATP6V0BQ99437 205 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 CA1P00915 261 aaPredicted RBP7.82□□□□□ -1.16
SMG6-213ENST00000573166 RPL13AP40429 203 aaKnown RBP7.82□□□□□ -1.16
SMG6-213ENST00000573166 Q6AWC8 147 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 ZNF48Q96MX3 618 aaPredicted RBP7.82□□□□□ -1.16
SMG6-213ENST00000573166 ZNF702PQ9H963 129 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 OSTCQ9NRP0 149 aa7.82□□□□□ -1.16
SMG6-213ENST00000573166 GGTLC3B5MD39 225 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 H3BVH4 76 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 BUB3O43684 328 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 UNQ9165/PRO28630Q6UXU0 137 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 FXYD5Q96DB9 178 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 MS4A6AQ9H2W1 248 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 GZMBP10144 247 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 PATE2Q6UY27 113 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 ZNF414Q96IQ9 312 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 NDUFAF3Q9BU61 184 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 BOD1L1Q8NFC6 3051 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 HLA-DMBP28068 263 aa7.81□□□□□ -1.16
SMG6-213ENST00000573166 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
SMG6-213ENST00000573166 EREGO14944 169 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 TCTAP57738 103 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 NUDT10Q8NFP7 164 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 MYOZ3Q8TDC0 251 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
SMG6-213ENST00000573166 NUDT11Q96G61 164 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 FLNCQ14315 2725 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 TRBV20OR9-2A0A075B6H5 130 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 TRBV24-1A0A075B6N3 115 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 GAGE10A6NGK3 116 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 LINC01551Q86U37 167 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 TRAV9-1A0A075B6T8 112 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 A0A1B0GW64 132 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 F6UB75 175 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 K7EMT4 169 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 GP9P14770 177 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 NMUP48645 174 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 JOSD1Q15040 202 aaPredicted RBP7.8□□□□□ -1.16
SMG6-213ENST00000573166 Q86TA4 180 aa7.8□□□□□ -1.16
SMG6-213ENST00000573166 NPIPB6E9PJ23 425 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 MORN5Q5VZ52 161 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 TMEM242Q9NWH2 141 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 FOXA3P55318 350 aaPredicted RBP7.79□□□□□ -1.16
SMG6-213ENST00000573166 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
SMG6-213ENST00000573166 H7C1H1 209 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 PLP1P60201 277 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 SRSF9Q13242 221 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMG6-213ENST00000573166 RCHY1Q96PM5 261 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 TEP1Q99973 2627 aaKnown RBP7.79□□□□□ -1.16
SMG6-213ENST00000573166 ATRQ13535 2644 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 SH2D1AO60880 128 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 HERVK_113P61574 105 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 CD300EQ496F6 205 aaPredicted RBP7.79□□□□□ -1.16
SMG6-213ENST00000573166 ERASQ7Z444 233 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
SMG6-213ENST00000573166 TRAV12-2A0A075B6T6 113 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 C16orf54Q6UWD8 224 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 FAM19A2Q8N3H0 131 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 C11orf1Q9H5F2 150 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TNFRSF18Q9Y5U5 241 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 WI2-2373I1.2A0A1W2PRP0 233 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 AMMECR1LQ6DCA0 310 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TMEM61Q8N0U2 210 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 CDKN1BP46527 198 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TMEM136Q6ZRR5 245 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 APRG1Q8IVJ8 170 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
SMG6-213ENST00000573166 MAP1LC3AQ9H492 121 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms