RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 A0A0J9YWU9 116 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 TRBV6-1A0A0K0K1D8 114 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 ZNF324O75467 553 aaPredicted RBP15.9■□□□□ 0.14
RAB40B-207ENST00000572603 PRM2P04554 102 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 GPX1P07203 203 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 RNASE4P34096 147 aaKnown RBP15.9■□□□□ 0.14
RAB40B-207ENST00000572603 AKR1C3P42330 323 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 IFITM2Q01629 132 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 PRNTQ86SH4 94 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 C8orf49Q96NF6 230 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 TMEM208Q9BTX3 173 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 TREM1Q9NP99 234 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 VAX2Q9UIW0 290 aa15.9■□□□□ 0.14
RAB40B-207ENST00000572603 SMIM9A6NGZ8 99 aa15.89■□□□□ 0.13
RAB40B-207ENST00000572603 Q6AWC8 147 aa15.89■□□□□ 0.13
RAB40B-207ENST00000572603 FMC1Q96HJ9 113 aa15.89■□□□□ 0.13
RAB40B-207ENST00000572603 ZNF705GA8MUZ8 300 aaPredicted RBP15.88■□□□□ 0.13
RAB40B-207ENST00000572603 H7BYZ3 331 aa15.88■□□□□ 0.13
RAB40B-207ENST00000572603 DEFB4AO15263 64 aa15.88■□□□□ 0.13
RAB40B-207ENST00000572603 TAGLN2P37802 199 aaKnown RBP15.88■□□□□ 0.13
RAB40B-207ENST00000572603 TMEM183BQ1AE95 376 aa15.88■□□□□ 0.13
RAB40B-207ENST00000572603 LINC01587Q99440 93 aa15.88■□□□□ 0.13
RAB40B-207ENST00000572603 NDFIP1Q9BT67 221 aa15.88■□□□□ 0.13
RAB40B-207ENST00000572603 TAS2R60P59551 318 aa15.87■□□□□ 0.13
RAB40B-207ENST00000572603 NIPSNAP3BQ9BS92 247 aa15.87■□□□□ 0.13
RAB40B-207ENST00000572603 ZNF80P51504 273 aaPredicted RBP15.86■□□□□ 0.13
RAB40B-207ENST00000572603 RRN3P1Q2M238 152 aa15.86■□□□□ 0.13
RAB40B-207ENST00000572603 ZNF506Q5JVG8 444 aa15.86■□□□□ 0.13
RAB40B-207ENST00000572603 PLAC8L1A1L4L8 177 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 RBFOX3A6NFN3 312 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 LTAP01374 205 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 AZU1P20160 251 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 UBE2G1P62253 170 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 SAPCD1Q5SSQ6 148 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 COX8CQ7Z4L0 72 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 FAM210AQ96ND0 272 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 PYGO2Q9BRQ0 406 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 LINC00467Q9BRT7 94 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 DERL1Q9BUN8 251 aa15.85■□□□□ 0.13
RAB40B-207ENST00000572603 PDE6DO43924 150 aa15.84■□□□□ 0.13
RAB40B-207ENST00000572603 TOR2AQ5JU69 321 aa15.84■□□□□ 0.13
RAB40B-207ENST00000572603 S100A9P06702 114 aaKnown RBP15.83■□□□□ 0.12
RAB40B-207ENST00000572603 RPL35P42766 123 aaKnown RBP15.83■□□□□ 0.12
RAB40B-207ENST00000572603 SMUG1Q53HV7 270 aa15.83■□□□□ 0.12
RAB40B-207ENST00000572603 RNASE8Q8TDE3 154 aaKnown RBP15.83■□□□□ 0.12
RAB40B-207ENST00000572603 ZFP30Q9Y2G7 519 aa15.83■□□□□ 0.12
RAB40B-207ENST00000572603 DYNC2H1Q8NCM8 4307 aaKnown RBP15.82■□□□□ 0.12
RAB40B-207ENST00000572603 GCGP01275 180 aa15.82■□□□□ 0.12
RAB40B-207ENST00000572603 ZNF767PQ75MW2 155 aa15.82■□□□□ 0.12
RAB40B-207ENST00000572603 ZC2HC1AQ96GY0 325 aa15.82■□□□□ 0.12
RAB40B-207ENST00000572603 WWC2-AS2Q96NR7 200 aa15.82■□□□□ 0.12
RAB40B-207ENST00000572603 CELA1Q9UNI1 258 aa15.82■□□□□ 0.12
RAB40B-207ENST00000572603 CSMD3Q7Z407 3707 aa15.81■□□□□ 0.12
RAB40B-207ENST00000572603 IGHV1OR15-1A0A075B7D0 117 aa15.81■□□□□ 0.12
RAB40B-207ENST00000572603 TRAV21A0A0B4J279 112 aa15.81■□□□□ 0.12
RAB40B-207ENST00000572603 TMEM263Q8WUH6 116 aaKnown RBP15.81■□□□□ 0.12
RAB40B-207ENST00000572603 STARD9Q9P2P6 4700 aa15.81■□□□□ 0.12
RAB40B-207ENST00000572603 TMEM189A5PLL7 270 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 HTN1P15515 57 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 MUC21Q5SSG8 566 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 TMEM183AQ8IXX5 376 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 EIF4E3Q8N5X7 224 aaKnown RBP15.8■□□□□ 0.12
RAB40B-207ENST00000572603 NHLRC2Q8NBF2 726 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 C16orf74Q96GX8 76 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 MLST8Q9BVC4 326 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 MED9Q9NWA0 146 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 C11orf21Q9P2W6 132 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 TP53TG3Q9ULZ0 132 aa15.8■□□□□ 0.12
RAB40B-207ENST00000572603 TRBV20OR9-2A0A075B6H5 130 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 RGS13O14921 159 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 PFN1P07737 140 aaKnown RBP15.79■□□□□ 0.12
RAB40B-207ENST00000572603 CRIP1P50238 77 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 ANXA2RQ3ZCQ2 193 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 C11orf72Q8NBR9 251 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 IL17DQ8TAD2 202 aa15.79■□□□□ 0.12
RAB40B-207ENST00000572603 TMEM250H0YL14 139 aa15.78■□□□□ 0.12
RAB40B-207ENST00000572603 NDUFS6O75380 124 aaKnown RBP15.78■□□□□ 0.12
RAB40B-207ENST00000572603 EMP1P54849 157 aa15.78■□□□□ 0.12
RAB40B-207ENST00000572603 TDRG1Q3Y452 100 aa15.78■□□□□ 0.12
RAB40B-207ENST00000572603 CENPWQ5EE01 88 aa15.78■□□□□ 0.12
RAB40B-207ENST00000572603 ZNF493Q6ZR52 646 aa15.78■□□□□ 0.12
RAB40B-207ENST00000572603 RAB19A4D1S5 217 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 CBY3A6NI87 242 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 IGLV2-8P01709 118 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 CLLU1Q5K131 121 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 BAGE2Q86Y30 109 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 EIF5A2Q9GZV4 153 aaKnown RBP15.77■□□□□ 0.12
RAB40B-207ENST00000572603 DKK2Q9UBU2 259 aa15.77■□□□□ 0.12
RAB40B-207ENST00000572603 FAM222AQ5U5X8 452 aa15.76■□□□□ 0.11
RAB40B-207ENST00000572603 PARLQ9H300 379 aa15.76■□□□□ 0.11
RAB40B-207ENST00000572603 NAGKQ9UJ70 344 aa15.76■□□□□ 0.11
RAB40B-207ENST00000572603 SRP19P09132 144 aaKnown RBP15.75■□□□□ 0.11
RAB40B-207ENST00000572603 SRSF3P84103 164 aaKnown RBP15.75■□□□□ 0.11
RAB40B-207ENST00000572603 ZNF674Q2M3X9 581 aa15.75■□□□□ 0.11
RAB40B-207ENST00000572603 C9JQL5 133 aa15.74■□□□□ 0.11
RAB40B-207ENST00000572603 SH2D1AO60880 128 aa15.74■□□□□ 0.11
RAB40B-207ENST00000572603 NANOS2P60321 138 aaKnown RBP15.74■□□□□ 0.11
RAB40B-207ENST00000572603 RAB14P61106 215 aa15.74■□□□□ 0.11
RAB40B-207ENST00000572603 IBA57Q5T440 356 aaKnown RBP15.74■□□□□ 0.11
RAB40B-207ENST00000572603 FAM159AQ6UWV7 190 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms