RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FHL2Q14192 279 aa12.42□□□□□ -0.42
CHD3-214ENST00000572579 ST6GAL2Q96JF0 529 aa12.42□□□□□ -0.42
CHD3-214ENST00000572579 SMIM3Q9BZL3 60 aa12.42□□□□□ -0.42
CHD3-214ENST00000572579 HSPB11Q9Y547 144 aa12.42□□□□□ -0.42
CHD3-214ENST00000572579 RGS13O14921 159 aa12.41□□□□□ -0.42
CHD3-214ENST00000572579 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
CHD3-214ENST00000572579 Q6ZRN7 208 aaPredicted RBP12.41□□□□□ -0.42
CHD3-214ENST00000572579 SPATA12Q7Z6I5 190 aa12.41□□□□□ -0.42
CHD3-214ENST00000572579 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
CHD3-214ENST00000572579 OR7C2O60412 319 aa12.4□□□□□ -0.42
CHD3-214ENST00000572579 ZNF266Q14584 549 aa12.4□□□□□ -0.42
CHD3-214ENST00000572579 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
CHD3-214ENST00000572579 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
CHD3-214ENST00000572579 A0A1W2PPQ1 181 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 RBAKDNA6NC62 111 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 CDK2AP2O75956 126 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 RPL12P30050 165 aaKnown RBP12.39□□□□□ -0.43
CHD3-214ENST00000572579 CRYBA4P53673 196 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 LYPD1Q8N2G4 141 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
CHD3-214ENST00000572579 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 PAX4O43316 350 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 UBE2L3P68036 154 aaKnown RBP12.38□□□□□ -0.43
CHD3-214ENST00000572579 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
CHD3-214ENST00000572579 SFTA3P0C7M3 94 aa12.37□□□□□ -0.43
CHD3-214ENST00000572579 LINC00315P59091 139 aa12.37□□□□□ -0.43
CHD3-214ENST00000572579 Q6AWC8 147 aa12.37□□□□□ -0.43
CHD3-214ENST00000572579 LYPD5Q6UWN5 251 aa12.37□□□□□ -0.43
CHD3-214ENST00000572579 HHLA3Q9XRX5 114 aa12.37□□□□□ -0.43
CHD3-214ENST00000572579 SSNA1O43805 119 aa12.36□□□□□ -0.43
CHD3-214ENST00000572579 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
CHD3-214ENST00000572579 CSN1S1P47710 185 aa12.36□□□□□ -0.43
CHD3-214ENST00000572579 ZNF479Q96JC4 524 aa12.36□□□□□ -0.43
CHD3-214ENST00000572579 HYLS1Q96M11 299 aa12.36□□□□□ -0.43
CHD3-214ENST00000572579 PRO0255Q9UI72 69 aa12.36□□□□□ -0.43
CHD3-214ENST00000572579 FAT1Q14517 4588 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 PGPA6NDG6 321 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 GNRH2O43555 120 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 NXPH4O95158 308 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 FUSP35637 526 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHD3-214ENST00000572579 SCGB1C1Q8TD33 95 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 RASL10AQ92737 203 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 ARPC5LQ9BPX5 153 aa12.35□□□□□ -0.43
CHD3-214ENST00000572579 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 IFNA5P01569 189 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 RAB2AP61019 212 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 KHDC3LQ587J8 217 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 OTORQ9NRC9 128 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
CHD3-214ENST00000572579 SIVA1O15304 175 aa12.33□□□□□ -0.44
CHD3-214ENST00000572579 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
CHD3-214ENST00000572579 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
CHD3-214ENST00000572579 IQCF2Q8IXL9 164 aa12.33□□□□□ -0.44
CHD3-214ENST00000572579 LENEPQ9Y5L5 61 aa12.33□□□□□ -0.44
CHD3-214ENST00000572579 TAS2R45P59539 299 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 GNG5P63218 68 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 TDRG1Q3Y452 100 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 TMED6Q8WW62 240 aa12.32□□□□□ -0.44
CHD3-214ENST00000572579 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 K7EQD1 137 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 PET100P0DJ07 73 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 Q5BKY6 102 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 GOLT1AQ6ZVE7 132 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 SGK494Q96LW2 274 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
CHD3-214ENST00000572579 F6UZH7 168 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 DEFA1P59665 94 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 DEFA3P59666 94 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 SLAQ13239 276 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
CHD3-214ENST00000572579 ACOT6Q3I5F7 207 aaPredicted RBP12.3□□□□□ -0.44
CHD3-214ENST00000572579 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
CHD3-214ENST00000572579 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 PQLC2Q6ZP29 291 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 SPXQ9BT56 116 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 NAGKQ9UJ70 344 aa12.29□□□□□ -0.44
CHD3-214ENST00000572579 TRGV4A0A0C4DH28 118 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 TYMSP04818 313 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 GYPEP15421 78 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
CHD3-214ENST00000572579 WFDC10BQ8IUB3 73 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 Q8N1X5 172 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 SUN5Q8TC36 379 aa12.28□□□□□ -0.44
CHD3-214ENST00000572579 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.45
CHD3-214ENST00000572579 IGLV2-11P01706 119 aa12.27□□□□□ -0.45
CHD3-214ENST00000572579 ARL14EPLP0DKL9 152 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms