RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 CXCL3P19876 107 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 FAUP35544 74 aaKnown RBP4.33□□□□□ -1.72
PRPF8-204ENST00000572445 CDKN1BP46527 198 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 LINC00315P59091 139 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
PRPF8-204ENST00000572445 OXA1LQ15070 435 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 PSG3Q16557 428 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 GFI1BQ5VTD9 330 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 SAMD13Q5VXD3 122 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 Q6ZRP5 223 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 Q6ZTI0 123 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 KRTAP19-1Q8IUB9 90 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 TOMM5Q8N4H5 51 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 GEMIN7Q9H840 131 aaKnown RBP4.33□□□□□ -1.72
PRPF8-204ENST00000572445 FLVCR2Q9UPI3 526 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 TIMM8BQ9Y5J9 83 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-204ENST00000572445 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
PRPF8-204ENST00000572445 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
PRPF8-204ENST00000572445 TRGV2A0A075B6R0 118 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 TRGV1A0A0A0MS02 117 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 ZNF701M0R085 212 aaPredicted RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 PITX3O75364 302 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 SFT2D2O95562 160 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 M6PRP20645 277 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 INPP1P49441 399 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 LINC01547P58512 204 aaPredicted RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 TAS2R60P59551 318 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 ERCC8Q13216 396 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 TTC32Q5I0X7 151 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 FFAR4Q5NUL3 377 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 OR10J6PQ8NGY7 276 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 DYNC2LI1Q8TCX1 351 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 TMEM263Q8WUH6 116 aaKnown RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 CIB3Q96Q77 187 aaPredicted RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 ARV1Q9H2C2 271 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 MRPL16Q9NX20 251 aaKnown RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 GSKIPQ9P0R6 139 aa4.32□□□□□ -1.72
PRPF8-204ENST00000572445 RSL24D1Q9UHA3 163 aaKnown RBP4.32□□□□□ -1.72
PRPF8-204ENST00000572445 DMBT1Q9UGM3 2413 aaPredicted RBP4.31□□□□□ -1.72
PRPF8-204ENST00000572445 TRAV5A0A0B4J249 113 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 UBE2L5PA0A1B0GUS4 154 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 A8MTW9 85 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 EPM2AB3EWF7 344 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 H3BMQ9 156 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 TEX46H3BTG2 121 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 GOSR2O14653 212 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
PRPF8-204ENST00000572445 ALDH3B2P48448 385 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 BCAP31P51572 246 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 PLP1P60201 277 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 BTN1A1Q13410 526 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 ESRGQ1W209 222 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 TMEM128Q5BJH2 165 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 MIC13Q5XKP0 118 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 LINC00305Q7Z4B0 112 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 BLNKQ8WV28 456 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 PCNPQ8WW12 178 aaKnown RBP4.31□□□□□ -1.72
PRPF8-204ENST00000572445 C11orf52Q96A22 123 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 GPR82Q96P67 336 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 MDFICQ9P1T7 246 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 CACFD1Q9UGQ2 172 aa4.31□□□□□ -1.72
PRPF8-204ENST00000572445 RCL1Q9Y2P8 373 aaKnown RBP4.31□□□□□ -1.72
PRPF8-204ENST00000572445 LSM5Q9Y4Y9 91 aaKnown RBP4.31□□□□□ -1.72
PRPF8-204ENST00000572445 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 IGKV2-40A0A087WW87 121 aaPredicted RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 DUXBA0A1W2PPF3 345 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 H7BYZ3 331 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 K7EQD1 137 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 M0R3E3 92 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 NXPH4O95158 308 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 CFDP00746 253 aaPredicted RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 IGKV2D-40P01614 121 aaPredicted RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 AP3S2P59780 193 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 S100A10P60903 97 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 ARL16Q0P5N6 197 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 IAH1Q2TAA2 248 aaPredicted RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 C10orf113Q5VZT2 155 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 TRIQKQ629K1 86 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 LCN15Q6UWW0 184 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 PATE2Q6UY27 113 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 Q6ZQT7 251 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 SMIM29Q86T20 159 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 TMEM256Q8N2U0 113 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 RXFP4Q8TDU9 374 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 RAB2BQ8WUD1 216 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 MGST2Q99735 147 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 SLIRPQ9GZT3 109 aaKnown RBP4.3□□□□□ -1.72
PRPF8-204ENST00000572445 Q9H3A6 140 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 V9GYH0 126 aa4.3□□□□□ -1.72
PRPF8-204ENST00000572445 C9orf170A2RU37 121 aa4.29□□□□□ -1.72
PRPF8-204ENST00000572445 H3BQ15 152 aa4.29□□□□□ -1.72
PRPF8-204ENST00000572445 CST7O76096 145 aa4.29□□□□□ -1.72
PRPF8-204ENST00000572445 INAFM2P0DMQ5 153 aa4.29□□□□□ -1.72
PRPF8-204ENST00000572445 CT45A10P0DMU9 189 aa4.29□□□□□ -1.72
PRPF8-204ENST00000572445 PYYP10082 97 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms