RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 OR10G4Q8NGN3 311 aa12.8□□□□□ -0.36
NUP88-203ENST00000572019 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
NUP88-203ENST00000572019 S100A5P33763 92 aa12.79□□□□□ -0.36
NUP88-203ENST00000572019 WFDC2Q14508 124 aa12.79□□□□□ -0.36
NUP88-203ENST00000572019 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
NUP88-203ENST00000572019 MIR17HGQ75NE6 70 aa12.79□□□□□ -0.36
NUP88-203ENST00000572019 FAM25EA8MYX2 175 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 K7EP13 123 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 FGF7P21781 194 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 PCNPQ8WW12 178 aaKnown RBP12.78□□□□□ -0.36
NUP88-203ENST00000572019 RASL10AQ92737 203 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 PHYHIPLQ96FC7 376 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 Q9HAA7 133 aa12.78□□□□□ -0.36
NUP88-203ENST00000572019 PSCAO43653 123 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 ZNF138P52744 262 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 TRIQKQ629K1 86 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 C12orf45Q8N5I9 185 aaPredicted RBP12.77□□□□□ -0.37
NUP88-203ENST00000572019 NTN5Q8WTR8 489 aaPredicted RBP12.77□□□□□ -0.37
NUP88-203ENST00000572019 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-16A0A0C4DH30 117 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 KRTAP29-1A8MX34 341 aaPredicted RBP12.76□□□□□ -0.37
NUP88-203ENST00000572019 OR10J4P0C629 311 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 SEC22CQ9BRL7 303 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 C20orf85Q9H1P6 137 aa12.76□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 ORM1P02763 201 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 NBEAP1P0C6P0 100 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 INPP1P49441 399 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 SULT1A1P50225 295 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 ZNF266Q14584 549 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 C10orf126Q8N4M7 172 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 NPCDR1Q9BY65 106 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 SLC25A31Q9H0C2 315 aa12.75□□□□□ -0.37
NUP88-203ENST00000572019 LYRM2Q9NU23 88 aaPredicted RBP12.75□□□□□ -0.37
NUP88-203ENST00000572019 IBA57-AS1B1ANH7 110 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 ZNF846Q147U1 533 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 LINC01556Q5JQF7 62 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 SPANXN2Q5MJ10 180 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 LINC00528Q8N1L1 170 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 Q8N3U1 123 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 TXNDC17Q9BRA2 123 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
NUP88-203ENST00000572019 HMCN2Q8NDA2 5059 aa12.74□□□□□ -0.37
NUP88-203ENST00000572019 TRAV4A0A0B4J268 109 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 C5orf51A6NDU8 294 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 C9JCJ5 164 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 GNRH2O43555 120 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 S100A11P31949 105 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 S100A10P60903 97 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 IL15RAQ13261 267 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 Q6ZSA8 131 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 THAP6Q8TBB0 222 aa12.73□□□□□ -0.37
NUP88-203ENST00000572019 PLA2G10O15496 165 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 RAB32Q13637 225 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 Q6AWC8 147 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 NHLRC2Q8NBF2 726 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 C2orf50Q96LR7 162 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 OR51M1Q9H341 326 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
NUP88-203ENST00000572019 TRAV6A0A075B6T7 132 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 CCDC160A6NGH7 325 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 LINC01620Q4KN68 170 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 SPXQ9BT56 116 aa12.71□□□□□ -0.37
NUP88-203ENST00000572019 RBM38Q9H0Z9 239 aaKnown RBP12.71□□□□□ -0.37
NUP88-203ENST00000572019 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.38
NUP88-203ENST00000572019 EIF3GO75821 320 aaKnown RBP eCLIP12.7□□□□□ -0.38
NUP88-203ENST00000572019 IL7P13232 177 aa12.7□□□□□ -0.38
NUP88-203ENST00000572019 GATA1P15976 413 aaPredicted RBP12.7□□□□□ -0.38
NUP88-203ENST00000572019 PPT1P50897 306 aa12.7□□□□□ -0.38
NUP88-203ENST00000572019 KRTAP10-4P60372 401 aaPredicted RBP12.7□□□□□ -0.38
NUP88-203ENST00000572019 RANP62826 216 aaKnown RBP12.7□□□□□ -0.38
NUP88-203ENST00000572019 NHLH2Q02577 135 aa12.7□□□□□ -0.38
NUP88-203ENST00000572019 PAXXQ9BUH6 204 aa12.7□□□□□ -0.38
NUP88-203ENST00000572019 FAT3Q8TDW7 4589 aa12.7□□□□□ -0.38
NUP88-203ENST00000572019 LECT2O14960 151 aa12.69□□□□□ -0.38
NUP88-203ENST00000572019 PLA2G1BP04054 148 aaKnown RBP12.69□□□□□ -0.38
NUP88-203ENST00000572019 TIRAPP58753 221 aa12.69□□□□□ -0.38
NUP88-203ENST00000572019 FAM159AQ6UWV7 190 aa12.69□□□□□ -0.38
NUP88-203ENST00000572019 STX12Q86Y82 276 aa12.69□□□□□ -0.38
NUP88-203ENST00000572019 TRGV11A0A075B6L2 103 aa12.68□□□□□ -0.38
NUP88-203ENST00000572019 C1QBP02746 253 aa12.68□□□□□ -0.38
NUP88-203ENST00000572019 HBG1P69891 147 aa12.68□□□□□ -0.38
NUP88-203ENST00000572019 HBG2P69892 147 aa12.68□□□□□ -0.38
NUP88-203ENST00000572019 RBAKDNA6NC62 111 aa12.67□□□□□ -0.38
NUP88-203ENST00000572019 CENPXA8MT69 81 aa12.67□□□□□ -0.38
NUP88-203ENST00000572019 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
NUP88-203ENST00000572019 M0R2P5 195 aa12.67□□□□□ -0.38
NUP88-203ENST00000572019 TYMSP04818 313 aa12.67□□□□□ -0.38
NUP88-203ENST00000572019 PVALBP20472 110 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms