RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IGKV1OR2-108A0A075B7D4 117 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 A0A087WWC5 75 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 SMCO3A2RU48 225 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
CHD3-213ENST00000571249 RHEBQ15382 184 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 KLK9Q2XQG4 91 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 TTC32Q5I0X7 151 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 MIC13Q5XKP0 118 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 LCN15Q6UWW0 184 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 GBGT1Q8N5D6 347 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 CSNK1G2-AS1Q8NCQ2 148 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 OR1P1Q8NH06 330 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 HINT2Q9BX68 163 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 Q9H8V8 135 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
CHD3-213ENST00000571249 FAM74A7A6NL05 159 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 B4DEV8 164 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 CORTO00230 105 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 CHEK1O14757 476 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 ZNF207O43670 478 aaKnown RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 REG1AP05451 166 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 DNAH10OSP0CZ25 163 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 OR13C7P0DN81 318 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 CCL18P55774 89 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 DEFB131AP59861 70 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 B2MP61769 119 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 SELENOTP62341 195 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 RHOBP62745 196 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 MEF2BQ02080 365 aaPredicted RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 PNRC1Q12796 327 aaPredicted RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 FAM74A3Q4VXF1 159 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 C10orf55Q5SWW7 151 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 FAM122CQ6P4D5 195 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 IQCF2Q8IXL9 164 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 CYB561D1Q8N8Q1 229 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 RXFP4Q8TDU9 374 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 TMEM190Q8WZ59 177 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 RNF2Q99496 336 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 FNDC4Q9H6D8 234 aaPredicted RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 SLC25A22Q9H936 323 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 DAZ1Q9NQZ3 744 aaKnown RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 SMCO4Q9NRQ5 59 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 GNG13Q9P2W3 67 aa4.78□□□□□ -1.64
CHD3-213ENST00000571249 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
CHD3-213ENST00000571249 IGKV1D-37A0A075B6S9 117 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 IGHV3OR16-8A0A075B7F1 116 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 A0A1B0GV50 99 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 A0A1W2PPV4 95 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 C7orf77A4D0Y5 90 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 H3BQ15 152 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 CLN5O75503 358 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 NUDT3O95989 172 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 CXorf1O96002 111 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 OR5G3P0C626 314 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 GPR183P32249 361 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 FGF8P55075 233 aaPredicted RBP4.77□□□□□ -1.65
CHD3-213ENST00000571249 PLP1P60201 277 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 USF2Q15853 346 aaPredicted RBP4.77□□□□□ -1.65
CHD3-213ENST00000571249 GCSAMLQ5JQS6 135 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 Q6ZRN7 208 aaPredicted RBP4.77□□□□□ -1.65
CHD3-213ENST00000571249 CYP2G1PQ6ZSU1 146 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 TRPT1Q86TN4 253 aaKnown RBP4.77□□□□□ -1.65
CHD3-213ENST00000571249 C15orf54Q8N8G6 183 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 TVP23CQ96ET8 276 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 TRGV9Q99603 122 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 MRPL32Q9BYC8 188 aaKnown RBP4.77□□□□□ -1.65
CHD3-213ENST00000571249 SDF2L1Q9HCN8 221 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 TMEM242Q9NWH2 141 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
CHD3-213ENST00000571249 TRBV7-1A0A0A6YYK4 115 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 ZFP92A6NM28 416 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 COLCA2A8K830 154 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 F6UZH7 168 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 I3L2K1 104 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 GCHFRP30047 84 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 OR10J1P30954 320 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 LINC00315P59091 139 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 PIK3CD-AS1Q5SR53 167 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 FAM222AQ5U5X8 452 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 ERASQ7Z444 233 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 YPEL4Q96NS1 127 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 PFDN5Q99471 154 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 TMEM70Q9BUB7 260 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 Q9H3A6 140 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 TMPRSS5Q9H3S3 457 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 ZNF586Q9NXT0 402 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 DOK5Q9P104 306 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 NAT8Q9UHE5 227 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 SMPXQ9UHP9 88 aa4.76□□□□□ -1.65
CHD3-213ENST00000571249 IGHV3-49A0A0A0MS15 119 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 HELTA6NFD8 242 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
CHD3-213ENST00000571249 KNCNA6PVL3 124 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms