RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 BTN1A1Q13410 526 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
CCDC40-205ENST00000571028 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 C11orf45Q8TAV5 145 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 PCNPQ8WW12 178 aaKnown RBP9.58□□□□□ -0.88
CCDC40-205ENST00000571028 ATG101Q9BSB4 218 aa9.58□□□□□ -0.88
CCDC40-205ENST00000571028 TRAV1-1A0A0B4J248 108 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 PPT1P50897 306 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
CCDC40-205ENST00000571028 PRR9Q5T870 116 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-205ENST00000571028 CYB561D1Q8N8Q1 229 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 NKX6-2Q9C056 277 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-205ENST00000571028 PSG8Q9UQ74 426 aa9.57□□□□□ -0.88
CCDC40-205ENST00000571028 SERTM2A0A1B0GWG4 89 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 C11orf94C9JXX5 98 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 IFNA1P01562 189 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 MIFP14174 115 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 AKR1C3P42330 323 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 FLI1Q01543 452 aaPredicted RBP9.56□□□□□ -0.88
CCDC40-205ENST00000571028 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 Q6ZQT7 251 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 ZFAND2AQ8N6M9 145 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 NDFIP1Q9BT67 221 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 TREM1Q9NP99 234 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 MANBALQ9NQG1 85 aa9.56□□□□□ -0.88
CCDC40-205ENST00000571028 LOC102723971A0A1B0GUV8 181 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 SCO2A0A1W2PP80 73 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 PRSS29PA6NIE9 313 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 IGLL5B9A064 214 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 CRISP2P16562 243 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 Q8NAQ8 132 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 TVP23CQ96ET8 276 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 C8orf49Q96NF6 230 aa9.55□□□□□ -0.88
CCDC40-205ENST00000571028 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 A0A1B0GVY2 172 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 KLLNB2CW77 178 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 RGS13O14921 159 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 AZU1P20160 251 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 UBE2G1P62253 170 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 CCDC28AQ8IWP9 274 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 TMEM75Q8N9X5 138 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 ZNF680Q8NEM1 530 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
CCDC40-205ENST00000571028 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 IGLV2-11P01706 119 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 BCL2P10415 239 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 TAS2R60P59551 318 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 MUC21Q5SSG8 566 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 TMEM256Q8N2U0 113 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 NEU1Q99519 415 aa9.53□□□□□ -0.88
CCDC40-205ENST00000571028 CBY3A6NI87 242 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 H7BYZ3 331 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 NMBP08949 121 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 ZNF767PQ75MW2 155 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 Q86TA4 180 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 C20orf144Q9BQM9 153 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 LENEPQ9Y5L5 61 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 PKHD1P08F94 4074 aa9.52□□□□□ -0.89
CCDC40-205ENST00000571028 TRBV7-9A0A0J9YWB2 115 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 ZNF324O75467 553 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-205ENST00000571028 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
CCDC40-205ENST00000571028 SAPCD1Q5SSQ6 148 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 TCEAL7Q9BRU2 100 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
CCDC40-205ENST00000571028 TP53TG3Q9ULZ0 132 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 CELA1Q9UNI1 258 aa9.51□□□□□ -0.89
CCDC40-205ENST00000571028 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 GCGP01275 180 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
CCDC40-205ENST00000571028 TMEM183BQ1AE95 376 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 SMUG1Q53HV7 270 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 TOR2AQ5JU69 321 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 PYGO2Q9BRQ0 406 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 KRTAP4-5Q9BYR2 181 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
CCDC40-205ENST00000571028 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 APLNQ9ULZ1 77 aa9.5□□□□□ -0.89
CCDC40-205ENST00000571028 IGHV1OR15-1A0A075B7D0 117 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 TRAV21A0A0B4J279 112 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
CCDC40-205ENST00000571028 CEBPGP53567 150 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 EIF4E3Q8N5X7 224 aaKnown RBP9.49□□□□□ -0.89
CCDC40-205ENST00000571028 DERL1Q9BUN8 251 aa9.49□□□□□ -0.89
CCDC40-205ENST00000571028 PDE6DO43924 150 aa9.48□□□□□ -0.89
CCDC40-205ENST00000571028 SPART-AS1P0CW21 52 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms