RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SPINK13Q1W4C9 94 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 SMUG1Q53HV7 270 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 PRR27Q6MZM9 219 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRPT1Q86TN4 253 aaKnown RBP4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 NHLRC2Q8NBF2 726 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM208Q9BTX3 173 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 AGPAT4-IT1Q9H0P7 198 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF492Q9P255 531 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 NAT8Q9UHE5 227 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 COL6A5A8TX70 2615 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM218A2RU14 115 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRBOX1C9JBD0 128 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 FXYD7P58549 80 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM241Q24JQ0 296 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 KPRPQ5T749 579 aaPredicted RBP4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM183AQ8IXX5 376 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 DAZAP1Q96EP5 407 aaKnown RBP4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 IGF2BP2-AS1Q96M15 143 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 AURKAIP1Q9NWT8 199 aaPredicted RBP4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 NAGKQ9UJ70 344 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 PLA2G2DQ9UNK4 145 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 KLF12Q9Y4X4 402 aa4.86□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 C7orf71A4D174 169 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 C9JQL5 133 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 M0R036 132 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 GCGP01275 180 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 IGLV2-11P01706 119 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 CRISP2P16562 243 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 RNASE4P34096 147 aaKnown RBP4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 FAM162BQ5T6X4 162 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 SLC7A5P1Q8MH63 180 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 C15orf54Q8N8G6 183 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 C8orf49Q96NF6 230 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 ASCL2Q99929 193 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 SEC11CQ9BY50 192 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 CSTL1Q9H114 145 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 XCL2Q9UBD3 114 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 GOLT1BQ9Y3E0 138 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 LY96Q9Y6Y9 160 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 WNK1Q9H4A3 2382 aa4.85□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRBV20OR9-2A0A075B6H5 130 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRAV12-3A0A0B4J271 114 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 KIR2DL5BA0A0G2JN68 375 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 KIR2DL5BA0A0G2JPC4 375 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 XKRY2A2RUG3 117 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 RBMY1BA6NDE4 496 aaKnown RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 RBMY1EA6NEQ0 496 aaKnown RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 PGPEP1LA6NFU8 196 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 A8MTW9 85 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 UBE2CO00762 179 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 P01737 135 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 PRB2P02812 416 aaPredicted RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 PFN1P07737 140 aaKnown RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 RBMY1DP0C7P1 496 aaKnown RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 ERVFC1-1P60608 527 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 BTN1A1Q13410 526 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 OR5I1Q13606 314 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 IBA57Q5T440 356 aaKnown RBP4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 GFI1BQ5VTD9 330 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 FAM159AQ6UWV7 190 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 AMTNQ6UX39 209 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 LINC01551Q86U37 167 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 KIR2DL5AQ8N109 375 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM256Q8N2U0 113 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 SVBPQ8N300 66 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZFAND2AQ8N6M9 145 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 KIR2DL5BQ8NHK3 375 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 MRAPQ8TCY5 172 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 TVP23CQ96ET8 276 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZC2HC1AQ96GY0 325 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 C20orf144Q9BQM9 153 aa4.84□□□□□ -1.63
CTDNEP1-204ENST00000570484 STAB1Q9NY15 2570 aa4.84□□□□□ -1.64
CTDNEP1-204ENST00000570484 FABP5P3A8MUU1 101 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 A8MZ25 164 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 KLLNB2CW77 178 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 H7BYZ3 331 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 SH2D1AO60880 128 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 SNAPINO95295 136 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 APOC3P02656 99 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 FRMD6-AS1P0C7T7 363 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 ADCYAP1P18509 176 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 RPL23P62829 140 aaKnown RBP4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 Q6AWC8 147 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 KCNS1Q96KK3 526 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 FAM19A4Q96LR4 140 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 CARHSP1Q9Y2V2 147 aaKnown RBP4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 ANK2Q01484 3957 aa4.83□□□□□ -1.64
CTDNEP1-204ENST00000570484 TRGV11A0A075B6L2 103 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 CBY3A6NI87 242 aa4.82□□□□□ -1.64
CTDNEP1-204ENST00000570484 ZNF705GA8MUZ8 300 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms