RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TM2D3Q9BRN9 247 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 BIN3Q9NQY0 253 aa17.12■□□□□ 0.33
RAB40C-212ENST00000569575 SMIM9A6NGZ8 99 aa17.11■□□□□ 0.33
RAB40C-212ENST00000569575 Q6AWC8 147 aa17.11■□□□□ 0.33
RAB40C-212ENST00000569575 EIF4E3Q8N5X7 224 aaKnown RBP17.11■□□□□ 0.33
RAB40C-212ENST00000569575 NEU1Q99519 415 aa17.11■□□□□ 0.33
RAB40C-212ENST00000569575 NIPSNAP3BQ9BS92 247 aa17.11■□□□□ 0.33
RAB40C-212ENST00000569575 ZMAT4Q9H898 229 aa17.11■□□□□ 0.33
RAB40C-212ENST00000569575 H7BYZ3 331 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 SPRY2O43597 315 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 GNG4P50150 75 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 GFI1BQ5VTD9 330 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 ZNF705AQ6ZN79 300 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-212ENST00000569575 TVP23CQ96ET8 276 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 SGK494Q96LW2 274 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 LY96Q9Y6Y9 160 aa17.1■□□□□ 0.33
RAB40C-212ENST00000569575 TRAV21A0A0B4J279 112 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 PRB4P10163 310 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-212ENST00000569575 FXYD7P58549 80 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 PYGO2Q9BRQ0 406 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 LINC00467Q9BRT7 94 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 MLST8Q9BVC4 326 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 PARLQ9H300 379 aa17.09■□□□□ 0.33
RAB40C-212ENST00000569575 RNASE4P34096 147 aaKnown RBP17.08■□□□□ 0.32
RAB40C-212ENST00000569575 FABP5P3A8MUU1 101 aa17.07■□□□□ 0.32
RAB40C-212ENST00000569575 ZNF324O75467 553 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-212ENST00000569575 DEFB135Q30KP9 77 aa17.07■□□□□ 0.32
RAB40C-212ENST00000569575 TMEM208Q9BTX3 173 aa17.07■□□□□ 0.32
RAB40C-212ENST00000569575 DERL1Q9BUN8 251 aa17.07■□□□□ 0.32
RAB40C-212ENST00000569575 TRAV12-2A0A075B6T6 113 aa17.06■□□□□ 0.32
RAB40C-212ENST00000569575 PFN1P07737 140 aaKnown RBP17.06■□□□□ 0.32
RAB40C-212ENST00000569575 CENPWQ5EE01 88 aa17.06■□□□□ 0.32
RAB40C-212ENST00000569575 TRAV12-3A0A0B4J271 114 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 GCGP01275 180 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 SOHLH1Q5JUK2 328 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 C1orf158Q8N1D5 194 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 SMIM7Q9BQ49 75 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 OVOL2Q9BRP0 275 aa17.05■□□□□ 0.32
RAB40C-212ENST00000569575 ZNF727A8MUV8 499 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 MIFP14174 115 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 SRSF3P84103 164 aaKnown RBP17.04■□□□□ 0.32
RAB40C-212ENST00000569575 FAM162BQ5T6X4 162 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 KCNS1Q96KK3 526 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 C8orf49Q96NF6 230 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 LINC01587Q99440 93 aa17.04■□□□□ 0.32
RAB40C-212ENST00000569575 BTN1A1Q13410 526 aa17.03■□□□□ 0.32
RAB40C-212ENST00000569575 ZNF674Q2M3X9 581 aa17.03■□□□□ 0.32
RAB40C-212ENST00000569575 TDRG1Q3Y452 100 aa17.03■□□□□ 0.32
RAB40C-212ENST00000569575 ZNF493Q6ZR52 646 aa17.03■□□□□ 0.32
RAB40C-212ENST00000569575 OR11H2Q8NH07 326 aa17.03■□□□□ 0.32
RAB40C-212ENST00000569575 J3KRW8 73 aa17.02■□□□□ 0.32
RAB40C-212ENST00000569575 CEBPGP53567 150 aa17.02■□□□□ 0.32
RAB40C-212ENST00000569575 KIR3DS1Q14943 382 aa17.02■□□□□ 0.32
RAB40C-212ENST00000569575 COMMD7Q86VX2 200 aa17.02■□□□□ 0.32
RAB40C-212ENST00000569575 ZC2HC1AQ96GY0 325 aa17.02■□□□□ 0.32
RAB40C-212ENST00000569575 TRBV20OR9-2A0A075B6H5 130 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 TMEM189A5PLL7 270 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 C9JQL5 133 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 ANXA2RQ3ZCQ2 193 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 PRR9Q5T870 116 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 FAM159AQ6UWV7 190 aa17.01■□□□□ 0.31
RAB40C-212ENST00000569575 IGHV1OR15-1A0A075B7D0 117 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 IGLV2-8P01709 118 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 NDUFA5Q16718 116 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 TMEM241Q24JQ0 296 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 RRN3P1Q2M238 152 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 FBN3Q75N90 2809 aa17■□□□□ 0.31
RAB40C-212ENST00000569575 MEGF8Q7Z7M0 2845 aa16.99■□□□□ 0.31
RAB40C-212ENST00000569575 RBMY1A1P0DJD3 496 aaKnown RBP16.99■□□□□ 0.31
RAB40C-212ENST00000569575 RBMY1CP0DJD4 496 aa16.99■□□□□ 0.31
RAB40C-212ENST00000569575 RBMY1FQ15415 496 aaKnown RBP16.99■□□□□ 0.31
RAB40C-212ENST00000569575 NAT8Q9UHE5 227 aa16.99■□□□□ 0.31
RAB40C-212ENST00000569575 X6R8D5 127 aa16.99■□□□□ 0.31
RAB40C-212ENST00000569575 SFTA3P0C7M3 94 aa16.98■□□□□ 0.31
RAB40C-212ENST00000569575 ZNF80P51504 273 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-212ENST00000569575 OCC1Q8TAD7 63 aa16.98■□□□□ 0.31
RAB40C-212ENST00000569575 DAZAP1Q96EP5 407 aaKnown RBP16.98■□□□□ 0.31
RAB40C-212ENST00000569575 IGHV3OR16-12A0A075B7B8 117 aa16.97■□□□□ 0.31
RAB40C-212ENST00000569575 CRIP1P50238 77 aa16.97■□□□□ 0.31
RAB40C-212ENST00000569575 TMEM263Q8WUH6 116 aaKnown RBP16.97■□□□□ 0.31
RAB40C-212ENST00000569575 C16orf74Q96GX8 76 aa16.97■□□□□ 0.31
RAB40C-212ENST00000569575 TP53TG3Q9ULZ0 132 aa16.97■□□□□ 0.31
RAB40C-212ENST00000569575 TRGV11A0A075B6L2 103 aa16.96■□□□□ 0.31
RAB40C-212ENST00000569575 TMEM218A2RU14 115 aa16.96■□□□□ 0.31
RAB40C-212ENST00000569575 MGST1P10620 155 aaKnown RBP16.96■□□□□ 0.31
RAB40C-212ENST00000569575 IBA57Q5T440 356 aaKnown RBP16.96■□□□□ 0.31
RAB40C-212ENST00000569575 NHLRC2Q8NBF2 726 aa16.96■□□□□ 0.31
RAB40C-212ENST00000569575 SDF2L1Q9HCN8 221 aa16.96■□□□□ 0.31
RAB40C-212ENST00000569575 SH2D1AO60880 128 aa16.95■□□□□ 0.3
RAB40C-212ENST00000569575 PNRC1Q12796 327 aaPredicted RBP16.95■□□□□ 0.3
RAB40C-212ENST00000569575 LINC01559Q495D7 138 aa16.95■□□□□ 0.3
RAB40C-212ENST00000569575 LINC01551Q86U37 167 aa16.95■□□□□ 0.3
RAB40C-212ENST00000569575 C11orf68Q9H3H3 251 aaKnown RBP16.95■□□□□ 0.3
RAB40C-212ENST00000569575 TEX48A0A1B0GUV7 120 aa16.94■□□□□ 0.3
RAB40C-212ENST00000569575 CBY3A6NI87 242 aa16.94■□□□□ 0.3
RAB40C-212ENST00000569575 CXCL1P09341 107 aa16.94■□□□□ 0.3
RAB40C-212ENST00000569575 FAM231DQ6ZW35 169 aa16.94■□□□□ 0.3
RAB40C-212ENST00000569575 C19orf71A6NCJ1 209 aa16.93■□□□□ 0.3
RAB40C-212ENST00000569575 DNLZQ5SXM8 178 aa16.93■□□□□ 0.3
RAB40C-212ENST00000569575 Q8NAQ8 132 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms