RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	GPX1	P07203	203 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	SNRPC	P09234	159 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	GNAO1	P09471	354 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	LINC00694	P0DN24	101 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	HLA-DMA	P28067	261 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	CCR6	P51684	374 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	TSPAN5	P62079	268 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	POLR2G	P62487	172 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	ERCC8	Q13216	396 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	ELOB	Q15370	118 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	ZFP1	Q6P2D0	407 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	ENHO	Q6UWT2	76 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	PATE2	Q6UY27	113 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440		Q6ZRP5	223 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	RNASE11	Q8TAA1	199 aa	Known RBP	3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	LHFPL5	Q8TAF8	219 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	DTD1	Q8TEA8	209 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	LINC00477	Q96M19	166 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	MGLL	Q99685	303 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	CTDSP1	Q9GZU7	261 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	AGPAT4-IT1	Q9H0P7	198 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	HSPB7	Q9UBY9	170 aa		3.76	□□□□□ -1.81
BBS4-218	ENST00000569440	FBLL1	A6NHQ2	334 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	PRSS46	E5RG02	174 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	ANKRD65	E5RJM6	399 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440		M0R2P5	195 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	B3GALNT1	O75752	331 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	PGAM2	P15259	253 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	ANXA7	P20073	488 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	C22orf42	Q6IC83	251 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	KRTAP26-1	Q6PEX3	210 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	SELENOH	Q8IZQ5	122 aa	Known RBP	3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	CYB561D1	Q8N8Q1	229 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	TMEM75	Q8N9X5	138 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	OR52I2	Q8NH67	350 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	LYPD6B	Q8NI32	183 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	GLYATL2	Q8WU03	294 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	CHCHD7	Q9BUK0	85 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	RBKS	Q9H477	322 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	SDF2L1	Q9HCN8	221 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	PXMP4	Q9Y6I8	212 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440	URGCP-MRPS24	S4R325	110 aa		3.75	□□□□□ -1.81
BBS4-218	ENST00000569440		H3BQ15	152 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440		H3BTX0	84 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	CIDEA	O60543	219 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	IGLC2	P0DOY2	106 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	RCVRN	P35243	200 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	UBE2M	P61081	183 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	MZT2B	Q6NZ67	158 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	CYP2G1P	Q6ZSU1	146 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	LHFPL1	Q86WI0	220 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	MRPL53	Q96EL3	112 aa	Known RBP	3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	LINC00479	Q96M42	142 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	RNF24	Q9Y225	148 aa		3.74	□□□□□ -1.81
BBS4-218	ENST00000569440	SCGB1D1	O95968	90 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	HLA-DQA1	P01909	254 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	TCRB	P04435	133 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	IL5	P05113	134 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	OR5G3	P0C626	314 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	SULT1A3	P0DMM9	295 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	SULT1A4	P0DMN0	295 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	INPP1	P49441	399 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	RAB31	Q13636	194 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	GUK1	Q16774	197 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	TMEM183B	Q1AE95	376 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	MAJIN	Q3KP22	176 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	MUC21	Q5SSG8	566 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	CFAP126	Q5VTH2	177 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	S100A7A	Q86SG5	101 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	TMEM183A	Q8IXX5	376 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	STPG4	Q8N801	248 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	PRSS3P2	Q8NHM4	247 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	SRR	Q9GZT4	340 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	DUSP21	Q9H596	190 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	NDUFB11	Q9NX14	153 aa		3.73	□□□□□ -1.81
BBS4-218	ENST00000569440	IGLV1-50	A0A075B6I6	118 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440		A0A087WX48	190 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440		M0R3E3	92 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	RHOD	O00212	210 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	CIB2	O75838	187 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	LINC00869	P0C866	280 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	MGST1	P10620	155 aa	Known RBP	3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	PRSS3	P35030	304 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	RAB11A	P62491	216 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	COX6A2	Q02221	97 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	ZNF546	Q86UE3	836 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	BPIFA4P	Q86YQ2	179 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	INO80E	Q8NBZ0	244 aa	Predicted RBP	3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	MPLKIP	Q8TAP9	179 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	GPX8	Q8TED1	209 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	ARV1	Q9H2C2	271 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	COPZ2	Q9P299	210 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	C11orf21	Q9P2W6	132 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440		Q9UF83	564 aa		3.72	□□□□□ -1.81
BBS4-218	ENST00000569440	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.71	□□□□□ -1.82
BBS4-218	ENST00000569440	IGHV3-73	A0A0B4J1V6	119 aa		3.71	□□□□□ -1.82
BBS4-218	ENST00000569440	TRBV7-9	A0A0J9YWB2	115 aa		3.71	□□□□□ -1.82
BBS4-218	ENST00000569440	PGP	A6NDG6	321 aa		3.71	□□□□□ -1.82
BBS4-218	ENST00000569440	GAGE12J	A6NER3	117 aa		3.71	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms