RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TMEM263Q8WUH6 116 aaKnown RBP9.17□□□□□ -0.94
CDT1-203ENST00000569140 PYGO2Q9BRQ0 406 aa9.17□□□□□ -0.94
CDT1-203ENST00000569140 TREM1Q9NP99 234 aa9.17□□□□□ -0.94
CDT1-203ENST00000569140 NAGKQ9UJ70 344 aa9.17□□□□□ -0.94
CDT1-203ENST00000569140 EPDR1Q9UM22 224 aa9.17□□□□□ -0.94
CDT1-203ENST00000569140 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 SNURFLB1AK76 121 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 IGLL5B9A064 214 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 NMBP08949 121 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 PRNTQ86SH4 94 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 ATG101Q9BSB4 218 aa9.16□□□□□ -0.94
CDT1-203ENST00000569140 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
CDT1-203ENST00000569140 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
CDT1-203ENST00000569140 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 PEX7O00628 323 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 PAGE4O60829 102 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 PPT1P50897 306 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 Q6ZQT7 251 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.94
CDT1-203ENST00000569140 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
CDT1-203ENST00000569140 NKX6-2Q9C056 277 aaPredicted RBP9.15□□□□□ -0.94
CDT1-203ENST00000569140 PSG8Q9UQ74 426 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 LENEPQ9Y5L5 61 aa9.15□□□□□ -0.94
CDT1-203ENST00000569140 STARD9Q9P2P6 4700 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 IGHV1OR15-1A0A075B7D0 117 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 TRAV34A0A0B4J273 112 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 LYRM9A8MSI8 78 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 TEX46H3BTG2 121 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 ZNF324O75467 553 aaPredicted RBP9.14□□□□□ -0.95
CDT1-203ENST00000569140 ATP5G3P48201 142 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 RAB5CP51148 216 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
CDT1-203ENST00000569140 TMEM75Q8N9X5 138 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
CDT1-203ENST00000569140 PLAC8L1A1L4L8 177 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 SULT1A2P50226 295 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 UBE2G1P62253 170 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 FAM159AQ6UWV7 190 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 LINC00479Q96M42 142 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 TP53TG3Q9ULZ0 132 aa9.13□□□□□ -0.95
CDT1-203ENST00000569140 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 GAGE7O76087 117 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 LY6G6CO95867 125 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 AKR1C3P42330 323 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 Q6AWC8 147 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 ALKAL2Q6UX46 152 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
CDT1-203ENST00000569140 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 LCE6AA0A183 80 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
CDT1-203ENST00000569140 GCGP01275 180 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 ZNF415Q09FC8 603 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 Q86TA4 180 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 TMEM183AQ8IXX5 376 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 LINC00467Q9BRT7 94 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 ARL2-SNX15V9GYD0 113 aa9.11□□□□□ -0.95
CDT1-203ENST00000569140 TRGV11A0A075B6L2 103 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 TRGV1A0A0A0MS02 117 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 F5H768 121 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 ATP5G1P05496 136 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 CCL20P78556 96 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 SAPCD1Q5SSQ6 148 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 TCEAL7Q9BRU2 100 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 MANBALQ9NQG1 85 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 KLF12Q9Y4X4 402 aa9.1□□□□□ -0.95
CDT1-203ENST00000569140 TRGV2A0A075B6R0 118 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 IFNA1P01562 189 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 Q6ZTI0 123 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 FMC1Q96HJ9 113 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
CDT1-203ENST00000569140 MRPL16Q9NX20 251 aaKnown RBP9.09□□□□□ -0.95
CDT1-203ENST00000569140 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
CDT1-203ENST00000569140 PFN1P07737 140 aaKnown RBP9.08□□□□□ -0.96
CDT1-203ENST00000569140 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
CDT1-203ENST00000569140 TCL1AP56279 114 aa9.08□□□□□ -0.96
CDT1-203ENST00000569140 IBA57Q5T440 356 aaKnown RBP9.08□□□□□ -0.96
CDT1-203ENST00000569140 TRAV1-1A0A0B4J248 108 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 GNRH2O43555 120 aa9.07□□□□□ -0.96
CDT1-203ENST00000569140 TYMSP04818 313 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms