RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 FFAR4Q5NUL3 377 aa13.02□□□□□ -0.33
SPSB3-210ENST00000568416 ARPC5LQ9BPX5 153 aa13.02□□□□□ -0.33
SPSB3-210ENST00000568416 MRPL16Q9NX20 251 aaKnown RBP13.02□□□□□ -0.33
SPSB3-210ENST00000568416 PET100P0DJ07 73 aa13.01□□□□□ -0.33
SPSB3-210ENST00000568416 BTF3P20290 206 aaKnown RBP13.01□□□□□ -0.33
SPSB3-210ENST00000568416 UBE2L3P68036 154 aaKnown RBP13.01□□□□□ -0.33
SPSB3-210ENST00000568416 ZNF266Q14584 549 aa13.01□□□□□ -0.33
SPSB3-210ENST00000568416 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
SPSB3-210ENST00000568416 SSNA1O43805 119 aa13□□□□□ -0.33
SPSB3-210ENST00000568416 RPL12P30050 165 aaKnown RBP13□□□□□ -0.33
SPSB3-210ENST00000568416 ZNF415Q09FC8 603 aa13□□□□□ -0.33
SPSB3-210ENST00000568416 KHDC3LQ587J8 217 aa13□□□□□ -0.33
SPSB3-210ENST00000568416 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
SPSB3-210ENST00000568416 PAX4O43316 350 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 CDK2AP2O75956 126 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 IFNA5P01569 189 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 IGHV3-53P01767 116 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 TAS2R45P59539 299 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 KRTAP4-5Q9BYR2 181 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 PRO0255Q9UI72 69 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 LENEPQ9Y5L5 61 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 ICOSQ9Y6W8 199 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 ABCA13Q86UQ4 5058 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 HSPG2P98160 4391 aa12.99□□□□□ -0.33
SPSB3-210ENST00000568416 DIRC3C9JPN6 131 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 DEFA1P59665 94 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 DEFA3P59666 94 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 FHL2Q14192 279 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 Q6AWC8 147 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 MBD2Q9UBB5 411 aa12.98□□□□□ -0.33
SPSB3-210ENST00000568416 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
SPSB3-210ENST00000568416 CRYBA4P53673 196 aa12.97□□□□□ -0.33
SPSB3-210ENST00000568416 SLAQ13239 276 aa12.97□□□□□ -0.33
SPSB3-210ENST00000568416 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
SPSB3-210ENST00000568416 HHLA3Q9XRX5 114 aa12.97□□□□□ -0.33
SPSB3-210ENST00000568416 SIVA1O15304 175 aa12.96□□□□□ -0.33
SPSB3-210ENST00000568416 LINC00315P59091 139 aa12.96□□□□□ -0.33
SPSB3-210ENST00000568416 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
SPSB3-210ENST00000568416 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
SPSB3-210ENST00000568416 PGPA6NDG6 321 aa12.95□□□□□ -0.34
SPSB3-210ENST00000568416 NXPH4O95158 308 aa12.95□□□□□ -0.34
SPSB3-210ENST00000568416 C8orf49Q96NF6 230 aa12.95□□□□□ -0.34
SPSB3-210ENST00000568416 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 TMEM183BQ1AE95 376 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 LYPD5Q6UWN5 251 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 FAM159AQ6UWV7 190 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 Q6ZRN7 208 aaPredicted RBP12.94□□□□□ -0.34
SPSB3-210ENST00000568416 IQCF2Q8IXL9 164 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 TMEM183AQ8IXX5 376 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 HYLS1Q96M11 299 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 SPXQ9BT56 116 aa12.94□□□□□ -0.34
SPSB3-210ENST00000568416 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 MRPL23Q16540 153 aaKnown RBP12.93□□□□□ -0.34
SPSB3-210ENST00000568416 ACOT6Q3I5F7 207 aaPredicted RBP12.93□□□□□ -0.34
SPSB3-210ENST00000568416 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 PQLC2Q6ZP29 291 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 RASL10AQ92737 203 aa12.93□□□□□ -0.34
SPSB3-210ENST00000568416 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 SFTA3P0C7M3 94 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 RAB2AP61019 212 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 RPH3ALQ9UNE2 315 aa12.92□□□□□ -0.34
SPSB3-210ENST00000568416 APOBP04114 4563 aaKnown RBP12.91□□□□□ -0.34
SPSB3-210ENST00000568416 A0A1W2PPV4 95 aa12.91□□□□□ -0.34
SPSB3-210ENST00000568416 GOLT1AQ6ZVE7 132 aa12.91□□□□□ -0.34
SPSB3-210ENST00000568416 NEGR1Q7Z3B1 354 aa12.91□□□□□ -0.34
SPSB3-210ENST00000568416 MAPKAPK5-AS1Q8N8E1 139 aa12.9□□□□□ -0.34
SPSB3-210ENST00000568416 OR10G9Q8NGN4 311 aa12.9□□□□□ -0.34
SPSB3-210ENST00000568416 OR10G7Q8NGN6 311 aa12.9□□□□□ -0.34
SPSB3-210ENST00000568416 TVP23CQ96ET8 276 aa12.9□□□□□ -0.34
SPSB3-210ENST00000568416 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 K7EQD1 137 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 GNRH2O43555 120 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 ALG5Q9Y673 324 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 DNAH5Q8TE73 4624 aa12.89□□□□□ -0.35
SPSB3-210ENST00000568416 TRAV8-1A0A0A6YYK1 113 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 TRAV4A0A0B4J268 109 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 HMGB3O15347 200 aaKnown RBP12.88□□□□□ -0.35
SPSB3-210ENST00000568416 GNG5P63218 68 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 MUC4Q99102 2169 aa12.88□□□□□ -0.35
SPSB3-210ENST00000568416 F6UZH7 168 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 M0R2P5 195 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 ORM1P02763 201 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 TYMSP04818 313 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 STAG3L2P0CL84 134 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 STAG3L3P0CL85 134 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 GYPEP15421 78 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 SRIP30626 198 aa12.87□□□□□ -0.35
SPSB3-210ENST00000568416 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms