RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 CRXO43186 299 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 LYRM1O43325 122 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 RLN2P04090 185 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 TCRBP04435 133 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 IL7P13232 177 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 LEPP41159 167 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 FHITP49789 147 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 S100A10P60903 97 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 RIGQ13278 110 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 OR5I1Q13606 314 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 FCN2Q15485 313 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 ATP6V1FQ16864 119 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 STX12Q86Y82 276 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 NEXN-AS1Q8NBZ9 246 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 ZNF431Q8TF32 576 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 GNPNAT1Q96EK6 184 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 C2orf50Q96LR7 162 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 AAMDCQ9H7C9 122 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 ZNF331Q9NQX6 463 aaPredicted RBP3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 UQCC1Q9NVA1 299 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 TIMM9Q9Y5J7 89 aa3.29□□□□□ -1.88
HERPUD1-213ENST00000568358 FRAS1Q86XX4 4008 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 TEX46H3BTG2 121 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 RTL8CO15255 209 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 MPDU1O75352 247 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 CCNKO75909 580 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE7O76087 117 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 CST7O76096 145 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 PRM2P04554 102 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE12FP0CL80 117 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE12GP0CL81 117 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE12IP0CL82 117 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 AZU1P20160 251 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 SULT1A1P50225 295 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 BAXQ07812 192 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE1Q13065 139 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 GAGE4Q13068 117 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 MRPL23Q16540 153 aaKnown RBP3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 MIC13Q5XKP0 118 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 PATE2Q6UY27 113 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 Q6ZR54 194 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 C17orf77Q96MU5 243 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 MGST2Q99735 147 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 PYGO2Q9BRQ0 406 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 PRELID1Q9Y255 219 aa3.28□□□□□ -1.88
HERPUD1-213ENST00000568358 TRGV2A0A075B6R0 118 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 TRAV12-3A0A0B4J271 114 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 A0A1B0GVY2 172 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 FAM24AA6NFZ4 105 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 MRPS12O15235 138 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF253O75346 499 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SLC25A5P05141 298 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 GPX1P07203 203 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 HIST1H1EP10412 219 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 M6PRP20645 277 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 FGF7P21781 194 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 BTCP35070 178 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 RPL29P47914 159 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 CYCSP99999 105 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 ARL16Q0P5N6 197 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 TTC32Q5I0X7 151 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 C6orf223Q8N319 242 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 MAPKAPK5-AS1Q8N8E1 139 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF680Q8NEM1 530 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 BLNKQ8WV28 456 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 S100ZQ8WXG8 99 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 LINC00477Q96M19 166 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 ODF3Q96PU9 254 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SDHCQ99643 169 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SEC22CQ9BRL7 303 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 CCDC32Q9BV29 185 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SLC25A31Q9H0C2 315 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 RBM38Q9H0Z9 239 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 KCNIP2Q9NS61 270 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 LYRM2Q9NU23 88 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 SLC39A9Q9NUM3 307 aa3.27□□□□□ -1.89
HERPUD1-213ENST00000568358 TRBV19A0A075B6N1 114 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 TRAV5A0A0B4J249 113 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 A0A0J9YY99 117 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 UBE2L5PA0A1B0GUS4 154 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 C7orf71A4D174 169 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 C16orf90A8MZG2 172 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 C17orf112F2Z3M2 114 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 H3BNG1 76 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 H3BQ15 152 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 SLC17A3O00476 420 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 PLA2G10O15496 165 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 CT45A10P0DMU9 189 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 IGLC2P0DOY2 106 aa3.26□□□□□ -1.89
HERPUD1-213ENST00000568358 PRB4P10163 310 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms