RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, human

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-223	ENST00000568301	INMT-MINDY4	F8WBC2	141 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	NBEAP1	P0C6P0	100 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	S100A10	P60903	97 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	RAB32	Q13637	225 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	FHL2	Q14192	279 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	FAM167A-AS1	Q96KT0	104 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	SEC22C	Q9BRL7	303 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	NPCDR1	Q9BY65	106 aa		10.25	□□□□□ -0.77
COMMD4-223	ENST00000568301	FLG2	Q5D862	2391 aa	Predicted RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	IGKV2D-40	P01614	121 aa	Predicted RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	IGHV3-53	P01767	116 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	ZNF138	P52744	262 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	GCSAML	Q5JQS6	135 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	PRR9	Q5T870	116 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301		Q5VSD8	79 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	FAM122C	Q6P4D5	195 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	NEGR1	Q7Z3B1	354 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	IQCF2	Q8IXL9	164 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	C8orf49	Q96NF6	230 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	ARPC5L	Q9BPX5	153 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	SLC25A2	Q9BXI2	301 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	MRPL32	Q9BYC8	188 aa	Known RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	GPN1	Q9HCN4	374 aa	Predicted RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	MRPL16	Q9NX20	251 aa	Known RBP	10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301	TNFRSF18	Q9Y5U5	241 aa		10.24	□□□□□ -0.77
COMMD4-223	ENST00000568301		Q6ZQT7	251 aa		10.23	□□□□□ -0.77
COMMD4-223	ENST00000568301	OR51M1	Q9H341	326 aa		10.23	□□□□□ -0.77
COMMD4-223	ENST00000568301	LY96	Q9Y6Y9	160 aa		10.23	□□□□□ -0.77
COMMD4-223	ENST00000568301		A0A087WTM6	91 aa		10.22	□□□□□ -0.77
COMMD4-223	ENST00000568301	ZNF415	Q09FC8	603 aa		10.22	□□□□□ -0.77
COMMD4-223	ENST00000568301	RGS21	Q2M5E4	152 aa		10.22	□□□□□ -0.77
COMMD4-223	ENST00000568301	MIR17HG	Q75NE6	70 aa		10.22	□□□□□ -0.77
COMMD4-223	ENST00000568301	RBAKDN	A6NC62	111 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	IFNA5	P01569	189 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	NHLH2	Q02577	135 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	ZNF266	Q14584	549 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	RASL10A	Q92737	203 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	FRZB	Q92765	325 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	FXYD5	Q96DB9	178 aa		10.21	□□□□□ -0.77
COMMD4-223	ENST00000568301	TRGV4	A0A0C4DH28	118 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301		K7EQD1	137 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	EVI2A	P22794	236 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	SRI	P30626	198 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	CSN1S1	P47710	185 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	KRTAP10-1	P60331	282 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	OR10G4	Q8NGN3	311 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	OR5C1	Q8NGR4	320 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	SPX	Q9BT56	116 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	PAXX	Q9BUH6	204 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	MSRB1	Q9NZV6	116 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301	MDFIC	Q9P1T7	246 aa		10.2	□□□□□ -0.78
COMMD4-223	ENST00000568301		E5RGE8	158 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	ORM1	P02763	201 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	OR10J4	P0C629	311 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	DNAH10OS	P0CZ25	163 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301		Q8TAT8	98 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	THAP6	Q8TBB0	222 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	ZNF479	Q96JC4	524 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	SLC25A31	Q9H0C2	315 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	KCNIP2	Q9NS61	270 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	LENEP	Q9Y5L5	61 aa		10.19	□□□□□ -0.78
COMMD4-223	ENST00000568301	SMR3B	P02814	79 aa	Predicted RBP	10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301	MUC21	Q5SSG8	566 aa		10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301		Q6AWC8	147 aa		10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301	WFDC10B	Q8IUB3	73 aa		10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301	PCNP	Q8WW12	178 aa	Known RBP	10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301	PHYHIPL	Q96FC7	376 aa		10.18	□□□□□ -0.78
COMMD4-223	ENST00000568301	SFTA3	P0C7M3	94 aa		10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	GYPE	P15421	78 aa		10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	RAN	P62826	216 aa	Known RBP	10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	FAM159A	Q6UWV7	190 aa		10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	TXNDC17	Q9BRA2	123 aa		10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	WDR61	Q9GZS3	305 aa	Known RBP	10.17	□□□□□ -0.78
COMMD4-223	ENST00000568301	TRGV11	A0A075B6L2	103 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301		C9JCJ5	164 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	OR7C2	O60412	319 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	GCSH	P23434	173 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	TDRG1	Q3Y452	100 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	C10orf126	Q8N4M7	172 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	TMED6	Q8WW62	240 aa		10.16	□□□□□ -0.78
COMMD4-223	ENST00000568301	DIRC3	C9JPN6	131 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	C17orf112	F2Z3M2	114 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	CYCS	P99999	105 aa	Known RBP	10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	TMEM183B	Q1AE95	376 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	SH2D6	Q7Z4S9	175 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	TMEM183A	Q8IXX5	376 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	NMES1	Q9C002	83 aa		10.15	□□□□□ -0.78
COMMD4-223	ENST00000568301	TRAV4	A0A0B4J268	109 aa		10.14	□□□□□ -0.79
COMMD4-223	ENST00000568301	CRYGD	P07320	174 aa		10.14	□□□□□ -0.79
COMMD4-223	ENST00000568301	TIRAP	P58753	221 aa		10.14	□□□□□ -0.79
COMMD4-223	ENST00000568301	OR5AC2	Q9NZP5	309 aa		10.14	□□□□□ -0.79
COMMD4-223	ENST00000568301	DNAH8	Q96JB1	4490 aa		10.14	□□□□□ -0.79
COMMD4-223	ENST00000568301		H0YIZ8	118 aa		10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301		M0R2P5	195 aa		10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301	UBE2L3	P68036	154 aa	Known RBP	10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301	HAMP	P81172	84 aa		10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301	OR4C5	Q8NGB2	326 aa		10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301	BOLA1	Q9Y3E2	137 aa		10.13	□□□□□ -0.79
COMMD4-223	ENST00000568301	ALG5	Q9Y673	324 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms