RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CLEC5AQ9NY25 188 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 MUC21A0A0G2JKD1 596 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 MUC21A0A140T8X8 626 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 GRIFINA4D1Z8 144 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 RBAKDNA6NC62 111 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 SOCS3O14543 225 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 ZNF688P0C7X2 276 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 ID1P41134 155 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 CT83Q5H943 113 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 MUC21Q5SSG8 566 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 OR4B1Q8NGF8 309 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 MRPL53Q96EL3 112 aaKnown RBP5.34□□□□□ -1.55
SMG1-215ENST00000568239 CITED2Q99967 270 aaPredicted RBP5.34□□□□□ -1.55
SMG1-215ENST00000568239 SSBP4Q9BWG4 385 aaPredicted RBP5.34□□□□□ -1.55
SMG1-215ENST00000568239 MS4A6AQ9H2W1 248 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 NOTCH3Q9UM47 2321 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 A8MWP6 167 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 LGALS9O00182 355 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 CD33P20138 364 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 KLF5Q13887 457 aaPredicted RBP5.34□□□□□ -1.56
SMG1-215ENST00000568239 PSMG4Q5JS54 123 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.56
SMG1-215ENST00000568239 WFDC12Q8WWY7 111 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 DLX4Q92988 240 aaPredicted RBP5.34□□□□□ -1.56
SMG1-215ENST00000568239 JMJD8Q96S16 334 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 GNB1LQ9BYB4 327 aa5.34□□□□□ -1.56
SMG1-215ENST00000568239 FABP5P3A8MUU1 101 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 UBE2CO00762 179 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 S100A2P29034 98 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 TMEM136Q6ZRR5 245 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 OR9G4Q8NGQ1 327 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 DCANP1Q8TF63 244 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 PEMTQ9UBM1 199 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 RNF114Q9Y508 228 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 A0A1B0GUS0 222 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 OVOL1O14753 267 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 IGKV3-20P01619 116 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 HLA-DQA1P01909 254 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
SMG1-215ENST00000568239 C9orf47Q6ZRZ4 202 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 OR8A1Q8NGG7 326 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 DYNLRB2Q8TF09 96 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 GFRA4Q9GZZ7 299 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 NAGKQ9UJ70 344 aa5.33□□□□□ -1.56
SMG1-215ENST00000568239 APCSP02743 223 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 MT-ND6P03923 174 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 HOXA5P20719 270 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 PAFAH1B2P68402 229 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 HBBP68871 147 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 CCL24O00175 119 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 ARMS2P0C7Q2 107 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 CRISP2P16562 243 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 SLAQ13239 276 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 COX19Q49B96 90 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 Q6ZQT7 251 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 WIPF2Q8TF74 440 aaPredicted RBP5.32□□□□□ -1.56
SMG1-215ENST00000568239 RAX2Q96IS3 184 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 LINC00477Q96M19 166 aa5.32□□□□□ -1.56
SMG1-215ENST00000568239 BAHCC1Q9P281 2608 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 A0A1B0GUT8 65 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 FAM231BA6NCW3 169 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 TCF21O43680 179 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 GPX1P07203 203 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 NSUN5P1Q3KNT7 163 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 GDF5OSQ5U4N7 250 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 ADAMTSL5Q6ZMM2 481 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 BAGE3Q86Y29 109 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 C16orf95Q9H693 158 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 TSSC4Q9Y5U2 329 aaPredicted RBP5.31□□□□□ -1.56
SMG1-215ENST00000568239 FABP4P15090 132 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 SRIP30626 198 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 SAMD13Q5VXD3 122 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 LYZL1Q6UWQ5 148 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 NIPBLQ6KC79 2804 aaeCLIP5.31□□□□□ -1.56
SMG1-215ENST00000568239 TEP1Q99973 2627 aaKnown RBP5.31□□□□□ -1.56
SMG1-215ENST00000568239 RNASE4P34096 147 aaKnown RBP5.31□□□□□ -1.56
SMG1-215ENST00000568239 KIR3DS1Q14943 382 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 PRR9Q5T870 116 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 RASL11AQ6T310 242 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 COX8CQ7Z4L0 72 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 TMEM61Q8N0U2 210 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 FER1L6-AS1Q8NA97 138 aa5.31□□□□□ -1.56
SMG1-215ENST00000568239 TIMM8BQ9Y5J9 83 aaPredicted RBP5.31□□□□□ -1.56
SMG1-215ENST00000568239 K7EQG2 157 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 RIGQ13278 110 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
SMG1-215ENST00000568239 EBLN2Q6P2I7 272 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 HIST3H2BBQ8N257 126 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 TMEM256Q8N2U0 113 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
SMG1-215ENST00000568239 RPS20P60866 119 aaKnown RBP5.3□□□□□ -1.56
SMG1-215ENST00000568239 TWIST1Q15672 202 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 Q6AWC8 147 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 C11orf21Q9P2W6 132 aa5.3□□□□□ -1.56
SMG1-215ENST00000568239 IGKV3D-20A0A0C4DH25 116 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms