RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ASCL2Q99929 193 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 TXNDC17Q9BRA2 123 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 ATG101Q9BSB4 218 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 AGPAT4-IT1Q9H0P7 198 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 LOC102724200A0A096LPH7 203 aaPredicted RBP5.67□□□□□ -1.5
SMG1-214ENST00000568038 SERTM2A0A1B0GWG4 89 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 F5H697 171 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 J3KRW8 73 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 PDE6DO43924 150 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 CT45A10P0DMU9 189 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 CEBPGP53567 150 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 DEFA6Q01524 100 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 PEA15Q15121 130 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 TMEM78Q5T7P6 136 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 C9orf47Q6ZRZ4 202 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 Q8TAT8 98 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 MRAPQ8TCY5 172 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 LINC00477Q96M19 166 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 TCEAL7Q9BRU2 100 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 SLC35B3Q9H1N7 401 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 MED9Q9NWA0 146 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 TRRAPQ9Y4A5 3859 aa5.67□□□□□ -1.5
SMG1-214ENST00000568038 A8MTW9 85 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 C9JQL5 133 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 M0R2Z0 102 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 IGLV2-11P01706 119 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 ZNF138P52744 262 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 NUTF2P61970 127 aaKnown RBP5.66□□□□□ -1.5
SMG1-214ENST00000568038 UBE2G1P62253 170 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 FLI1Q01543 452 aaPredicted RBP5.66□□□□□ -1.5
SMG1-214ENST00000568038 SPINK13Q1W4C9 94 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 AMTNQ6UX39 209 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 COMMD7Q86VX2 200 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 TMEM75Q8N9X5 138 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 C2CD4CQ8TF44 421 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 C11orf52Q96A22 123 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 DERL1Q9BUN8 251 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 TREM1Q9NP99 234 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 ZNF492Q9P255 531 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 XCL2Q9UBD3 114 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 PSG8Q9UQ74 426 aa5.66□□□□□ -1.5
SMG1-214ENST00000568038 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 RAB19A4D1S5 217 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 PRSS29PA6NIE9 313 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 A8MZ25 164 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 CA1P00915 261 aaPredicted RBP5.65□□□□□ -1.5
SMG1-214ENST00000568038 SRP19P09132 144 aaKnown RBP5.65□□□□□ -1.5
SMG1-214ENST00000568038 LEPP41159 167 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 TMEM183BQ1AE95 376 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 ZNF674Q2M3X9 581 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 LINC00322Q6ZN03 302 aaPredicted RBP5.65□□□□□ -1.5
SMG1-214ENST00000568038 TVP23CQ96ET8 276 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 FMC1Q96HJ9 113 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 CSTL1Q9H114 145 aa5.65□□□□□ -1.5
SMG1-214ENST00000568038 VWFP04275 2813 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 LINC00862A6NCI5 91 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 FBLL1A6NHQ2 334 aaKnown RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 TMEM250H0YL14 139 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 S100A9P06702 114 aaKnown RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 GPX1P07203 203 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 GIG44P09565 113 aaPredicted RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 TSPOP30536 169 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 RNASE4P34096 147 aaKnown RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 RPL35P42766 123 aaKnown RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 CDKN1BP46527 198 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 APOC4P55056 127 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
SMG1-214ENST00000568038 Q86TA4 180 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 BAGE2Q86Y30 109 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 ZFAND2AQ8N6M9 145 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 NHLRC2Q8NBF2 726 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 FAM19A4Q96LR4 140 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 C1orf43Q9BWL3 253 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 PARLQ9H300 379 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 KLF12Q9Y4X4 402 aa5.64□□□□□ -1.51
SMG1-214ENST00000568038 IGHV3OR16-12A0A075B7B8 117 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 KIR2DL5BA0A0G2JN68 375 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 KIR2DL5BA0A0G2JPC4 375 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 TRBV6-1A0A0K0K1D8 114 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 LTAP01374 205 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 CRISP2P16562 243 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 TAS2R60P59551 318 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 BTN1A1Q13410 526 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 CENPWQ5EE01 88 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 SAPCD1Q5SSQ6 148 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 PRR9Q5T870 116 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 KIR2DL5AQ8N109 375 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 ODF3Q96PU9 254 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 SMDT1Q9H4I9 107 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 ZFP30Q9Y2G7 519 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 LENEPQ9Y5L5 61 aa5.63□□□□□ -1.51
SMG1-214ENST00000568038 TRBV20OR9-2A0A075B6H5 130 aa5.62□□□□□ -1.51
SMG1-214ENST00000568038 TRAV12-3A0A0B4J271 114 aa5.62□□□□□ -1.51
SMG1-214ENST00000568038 TRBV7-9A0A0J9YWB2 115 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms