RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 OR7C2O60412 319 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 GAGE7O76087 117 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 NUDT3O95989 172 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 PTTG1O95997 202 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 IGKV2D-40P01614 121 aaPredicted RBP3.35□□□□□ -1.87
CLK3-219ENST00000567805 GPX1P07203 203 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 OR10J4P0C629 311 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 GAGE12FP0CL80 117 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 GAGE12GP0CL81 117 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 GAGE12IP0CL82 117 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 M6PRP20645 277 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 CSN1S1P47710 185 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 CCL18P55774 89 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 TAS2R45P59539 299 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 CD300CQ08708 224 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
CLK3-219ENST00000567805 BTN1A1Q13410 526 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 ANXA2RQ3ZCQ2 193 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 KHDC3LQ587J8 217 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 SOHLH1Q5JUK2 328 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 FFAR4Q5NUL3 377 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 EIF4E3Q8N5X7 224 aaKnown RBP3.35□□□□□ -1.87
CLK3-219ENST00000567805 C11orf72Q8NBR9 251 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 ZNF503Q96F45 646 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 PHYHIPLQ96FC7 376 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 VGLL1Q99990 258 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 SMIM3Q9BZL3 60 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 ZNF492Q9P255 531 aa3.35□□□□□ -1.87
CLK3-219ENST00000567805 TRAV26-1A0A087WT03 109 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 A0A1B0GVY2 172 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 A0A1W2PPV4 95 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 HOXA5P20719 270 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 RNASE4P34096 147 aaKnown RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 ZNF138P52744 262 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 TCL1AP56279 114 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 RANP62826 216 aaKnown RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 UBE2L3P68036 154 aaKnown RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 OR5I1Q13606 314 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 ZNF266Q14584 549 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 ACOT6Q3I5F7 207 aaPredicted RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 IBA57Q5T440 356 aaKnown RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 PRR9Q5T870 116 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 C1orf134Q5TEV5 83 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 PQLC2Q6ZP29 291 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 Q6ZTI0 123 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 ZFAND2AQ8N6M9 145 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 RXFP4Q8TDU9 374 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 GNPNAT1Q96EK6 184 aaPredicted RBP3.34□□□□□ -1.87
CLK3-219ENST00000567805 C18orf15Q96N68 181 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 Q9H3A6 140 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 TMPRSS5Q9H3S3 457 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 WFDC1Q9HC57 220 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 GSN-AS1Q9NRJ2 163 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 LENEPQ9Y5L5 61 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 ALG5Q9Y673 324 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 DNAH11Q96DT5 4516 aa3.34□□□□□ -1.87
CLK3-219ENST00000567805 TRGV2A0A075B6R0 118 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 IGHV1OR15-1A0A075B7D0 117 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 TRGV1A0A0A0MS02 117 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 A0A0J9YY99 117 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 NBDYA0A0U1RRE5 68 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 DIRC3C9JPN6 131 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 SPINK4O60575 86 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 ZNF415Q09FC8 603 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 FAM74A1Q5RGS3 127 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 SSX7Q7RTT5 188 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 ARL6IP6Q8N6S5 226 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 OR10G4Q8NGN3 311 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 OR10G9Q8NGN4 311 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 OR10G7Q8NGN6 311 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 Q8TAT8 98 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 TMED6Q8WW62 240 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 ASB13Q8WXK3 278 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 AQP10Q96PS8 301 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
CLK3-219ENST00000567805 MED28Q9H204 178 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 LINC00588Q9Y4M8 146 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 KLF12Q9Y4X4 402 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 MUC4Q99102 2169 aa3.33□□□□□ -1.88
CLK3-219ENST00000567805 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
CLK3-219ENST00000567805 PGPA6NDG6 321 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 MBP02144 154 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 GIPP09681 153 aaPredicted RBP3.32□□□□□ -1.88
CLK3-219ENST00000567805 CDC34P49427 236 aaPredicted RBP3.32□□□□□ -1.88
CLK3-219ENST00000567805 RAB2AP61019 212 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 SERF2P84101 59 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 SLAQ13239 276 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 TTC32Q5I0X7 151 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 Q6AWC8 147 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 FAM159AQ6UWV7 190 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 Q6ZQT7 251 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 C6orf223Q8N319 242 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 INO80EQ8NBZ0 244 aaPredicted RBP3.32□□□□□ -1.88
CLK3-219ENST00000567805 OR2G3Q8NGZ4 309 aa3.32□□□□□ -1.88
CLK3-219ENST00000567805 ST6GAL2Q96JF0 529 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms