RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TMEM78Q5T7P6 136 aa10.38□□□□□ -0.75
PALB2-205ENST00000567003 PCNPQ8WW12 178 aaKnown RBP10.38□□□□□ -0.75
PALB2-205ENST00000567003 SRRQ9GZT4 340 aa10.38□□□□□ -0.75
PALB2-205ENST00000567003 PRELID1Q9Y255 219 aa10.38□□□□□ -0.75
PALB2-205ENST00000567003 PSCAO43653 123 aa10.37□□□□□ -0.75
PALB2-205ENST00000567003 BTCP35070 178 aa10.37□□□□□ -0.75
PALB2-205ENST00000567003 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
PALB2-205ENST00000567003 TMEM14CQ9P0S9 112 aa10.37□□□□□ -0.75
PALB2-205ENST00000567003 FAM25EA8MYX2 175 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 RPL29P47914 159 aaKnown RBP10.36□□□□□ -0.75
PALB2-205ENST00000567003 C12orf45Q8N5I9 185 aaPredicted RBP10.36□□□□□ -0.75
PALB2-205ENST00000567003 MITD1Q8WV92 249 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 Q9HAA7 133 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 ZNF492Q9P255 531 aa10.36□□□□□ -0.75
PALB2-205ENST00000567003 IGSF23A1L1A6 192 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 NAP1L6A6NFF2 107 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 NMBP08949 121 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 FGF7P21781 194 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 S100A5P33763 92 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 INPP1P49441 399 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 PDE6HQ13956 83 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 TRIQKQ629K1 86 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 Q8N814 137 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 OR10G4Q8NGN3 311 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
PALB2-205ENST00000567003 AAMDCQ9H7C9 122 aa10.35□□□□□ -0.75
PALB2-205ENST00000567003 K7EP13 123 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 ZNF138P52744 262 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 MIR17HGQ75NE6 70 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 IQCF2Q8IXL9 164 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 C10orf126Q8N4M7 172 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 TXNDC17Q9BRA2 123 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 C20orf85Q9H1P6 137 aa10.34□□□□□ -0.75
PALB2-205ENST00000567003 IGHV3-16A0A0C4DH30 117 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 ORM1P02763 201 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 WFDC2Q14508 124 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 ZNF846Q147U1 533 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 PHYHIPLQ96FC7 376 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 SLC25A31Q9H0C2 315 aa10.33□□□□□ -0.76
PALB2-205ENST00000567003 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
PALB2-205ENST00000567003 C9JCJ5 164 aa10.32□□□□□ -0.76
PALB2-205ENST00000567003 OR10J4P0C629 311 aa10.32□□□□□ -0.76
PALB2-205ENST00000567003 S100A10P60903 97 aa10.32□□□□□ -0.76
PALB2-205ENST00000567003 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
PALB2-205ENST00000567003 RASL10AQ92737 203 aa10.32□□□□□ -0.76
PALB2-205ENST00000567003 SDHCQ99643 169 aaPredicted RBP10.32□□□□□ -0.76
PALB2-205ENST00000567003 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 C5orf51A6NDU8 294 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
PALB2-205ENST00000567003 IGHV3-30P01768 117 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 IGHV3-30-5P0DP03 117 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 SULT1A1P50225 295 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 PPT1P50897 306 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 ZNF266Q14584 549 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 SPANXN2Q5MJ10 180 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 SEC22CQ9BRL7 303 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 NAGKQ9UJ70 344 aa10.31□□□□□ -0.76
PALB2-205ENST00000567003 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 IBA57-AS1B1ANH7 110 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 OR4C5Q8NGB2 326 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 SPXQ9BT56 116 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
PALB2-205ENST00000567003 LYRM2Q9NU23 88 aaPredicted RBP10.3□□□□□ -0.76
PALB2-205ENST00000567003 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
PALB2-205ENST00000567003 S100A11P31949 105 aa10.29□□□□□ -0.76
PALB2-205ENST00000567003 THAP6Q8TBB0 222 aa10.29□□□□□ -0.76
PALB2-205ENST00000567003 CHAC2Q8WUX2 184 aa10.29□□□□□ -0.76
PALB2-205ENST00000567003 PAXXQ9BUH6 204 aa10.29□□□□□ -0.76
PALB2-205ENST00000567003 OR51M1Q9H341 326 aa10.29□□□□□ -0.76
PALB2-205ENST00000567003 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 LECT2O14960 151 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 GNRH2O43555 120 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 RAB32Q13637 225 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 OR10J3Q5JRS4 329 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 Q6AWC8 147 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 FAM159AQ6UWV7 190 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 STX12Q86Y82 276 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 Q8N3U1 123 aa10.28□□□□□ -0.76
PALB2-205ENST00000567003 TRAV6A0A075B6T7 132 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 CENPXA8MT69 81 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 GATA1P15976 413 aaPredicted RBP10.27□□□□□ -0.77
PALB2-205ENST00000567003 PVALBP20472 110 aaPredicted RBP10.27□□□□□ -0.77
PALB2-205ENST00000567003 TIRAPP58753 221 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 RANP62826 216 aaKnown RBP10.27□□□□□ -0.77
PALB2-205ENST00000567003 HBG1P69891 147 aa10.27□□□□□ -0.77
PALB2-205ENST00000567003 HBG2P69892 147 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms