RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.3
HERC2-208ENST00000566635 CT45A10P0DMU9 189 aa13.2□□□□□ -0.3
HERC2-208ENST00000566635 COX8CQ7Z4L0 72 aa13.2□□□□□ -0.3
HERC2-208ENST00000566635 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
HERC2-208ENST00000566635 TRAV2A0A0B4J234 112 aa13.19□□□□□ -0.3
HERC2-208ENST00000566635 P01737 135 aa13.19□□□□□ -0.3
HERC2-208ENST00000566635 ZNF124Q15973 351 aa13.19□□□□□ -0.3
HERC2-208ENST00000566635 A0A1W2PPQ1 181 aa13.19□□□□□ -0.3
HERC2-208ENST00000566635 BTF3P20290 206 aaKnown RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 TCL1AP56279 114 aa13.19□□□□□ -0.3
HERC2-208ENST00000566635 LBHQ53QV2 105 aaPredicted RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 DAZAP1Q96EP5 407 aaKnown RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
HERC2-208ENST00000566635 SH2D1AO60880 128 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 RPL19P84098 196 aaKnown RBP13.18□□□□□ -0.3
HERC2-208ENST00000566635 PRR9Q5T870 116 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 LINC00477Q96M19 166 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 SORL1Q92673 2214 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 TRAV25A0A0B4J276 109 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 J3KRW8 73 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 DEFB131AP59861 70 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 KCNIP4Q6PIL6 250 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 PPP1R14DQ9NXH3 145 aa13.18□□□□□ -0.3
HERC2-208ENST00000566635 A0A0J9YX75 114 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 OR4C46A6NHA9 309 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 IGLV1-51P01701 117 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 FAM162BQ5T6X4 162 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
HERC2-208ENST00000566635 IGKV3-20P01619 116 aa13.16□□□□□ -0.3
HERC2-208ENST00000566635 RPS10P46783 165 aaKnown RBP13.16□□□□□ -0.3
HERC2-208ENST00000566635 PKIAP61925 76 aa13.16□□□□□ -0.3
HERC2-208ENST00000566635 Q6ZQT7 251 aa13.16□□□□□ -0.3
HERC2-208ENST00000566635 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
HERC2-208ENST00000566635 TRRAPQ9Y4A5 3859 aa13.16□□□□□ -0.3
HERC2-208ENST00000566635 A0A1B0GV90 55 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 KNCNA6PVL3 124 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 GZMBP10144 247 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 KIR3DS1Q14943 382 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 CDPF1Q6NVV7 123 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 ZFAND2AQ8N6M9 145 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 OR2D3Q8NGH3 330 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 AGRNO00468 2067 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 TRBV24-1A0A075B6N3 115 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 SMIM27A0A1W2PRY6 76 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 NDUFA6P56556 154 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 EBLN2Q6P2I7 272 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 FAM210BQ96KR6 192 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 C2orf88Q9BSF0 95 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 LENEPQ9Y5L5 61 aa13.15□□□□□ -0.3
HERC2-208ENST00000566635 ODF3L2Q3SX64 289 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 HIST3H2BBQ8N257 126 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 PYGO2Q9BRQ0 406 aa13.14□□□□□ -0.31
HERC2-208ENST00000566635 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 DDTP30046 118 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 CT83Q5H943 113 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 NEU1Q99519 415 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 SPINK4O60575 86 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BKO60814 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BJP06899 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BOP23527 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BBP33778 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BDP58876 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BCP62807 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST2H2BEQ16778 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.13□□□□□ -0.31
HERC2-208ENST00000566635 OR10D4PQ8NGN7 298 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BHQ93079 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BNQ99877 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 HIST1H2BMQ99879 126 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
HERC2-208ENST00000566635 RAB4BP61018 213 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 STAB1Q9NY15 2570 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 FABP5P3A8MUU1 101 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 CRISP2P16562 243 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
HERC2-208ENST00000566635 HIGD1CA8MV81 97 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 A8MWL6 223 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 GPX1P07203 203 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 C3orf56Q8N813 242 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 NUP35Q8NFH5 326 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
HERC2-208ENST00000566635 TMEM189A5PLL7 270 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 DUSP14O95147 198 aaKnown RBP13.1□□□□□ -0.31
HERC2-208ENST00000566635 FRMD6-AS1P0C7T7 363 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 HLA-DRB4P13762 266 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 HLA-DRB4X5D2U9 266 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 M0R2Z0 102 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 ORM1P02763 201 aa13.1□□□□□ -0.31
HERC2-208ENST00000566635 RNASE4P34096 147 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms