RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 NPYP01303 97 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 SRSF1Q07955 248 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDH1-210ENST00000566612 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 Q6ZVH6 145 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 NACAE9PAV3 2078 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 LINC01548A6NM66 108 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 H3BUT2 72 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 SP5Q6BEB4 398 aaPredicted RBP9.05□□□□□ -0.96
CDH1-210ENST00000566612 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
CDH1-210ENST00000566612 PRAC2D3DTV9 90 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 IGHV4-39P01824 125 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 FABP2P12104 132 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 PEF1Q9UBV8 284 aaKnown RBP9.04□□□□□ -0.96
CDH1-210ENST00000566612 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
CDH1-210ENST00000566612 F6UB75 175 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 BLCAPP62952 87 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 PRSS22Q9GZN4 317 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 ABCA12Q86UK0 2595 aa9.04□□□□□ -0.96
CDH1-210ENST00000566612 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 IGHV4-38-2P0DP08 117 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 ITLN2Q8WWU7 325 aaPredicted RBP9.03□□□□□ -0.96
CDH1-210ENST00000566612 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 RNF223E7ERA6 249 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 DPM2O94777 84 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 USMG5Q96IX5 58 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 LINC00477Q96M19 166 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 H7C2G1 150 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 CRYGBP07316 175 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 PAX1P15863 534 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 GATA1P15976 413 aaPredicted RBP9.03□□□□□ -0.96
CDH1-210ENST00000566612 AMMECR1LQ6DCA0 310 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 OR2K2Q8NGT1 345 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 JMJD8Q96S16 334 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 PSMB11A5LHX3 300 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 SYNJ2BPP57105 145 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 KLF5Q13887 457 aaPredicted RBP9.03□□□□□ -0.96
CDH1-210ENST00000566612 LAGE3Q14657 143 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
CDH1-210ENST00000566612 IGKCP01834 107 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 NPSP0C0P6 89 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 DEFB1P60022 68 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 FOXE3Q13461 319 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 CFHR4Q92496 578 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 LOC400499M0QZD8 3231 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 MAP1AP78559 2803 aaPredicted RBP9.02□□□□□ -0.97
CDH1-210ENST00000566612 A0A087WWL8 130 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 WI2-2373I1.2A0A1W2PRP0 233 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 ZC2HC1BQ5TFG8 222 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 SFTA2Q6UW10 78 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 DTX2Q86UW9 622 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 DAZ1Q9NQZ3 744 aaKnown RBP9.02□□□□□ -0.97
CDH1-210ENST00000566612 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
CDH1-210ENST00000566612 IGHV4-30-2A0A087WSY4 118 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 C19orf84I3L1E1 186 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 J3QR89 54 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 BEX4Q9NWD9 120 aaPredicted RBP9.02□□□□□ -0.97
CDH1-210ENST00000566612 CENPEQ02224 2701 aa9.02□□□□□ -0.97
CDH1-210ENST00000566612 PKD1L2Q7Z442 2459 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 K7ERU9 68 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 BUB3O43684 328 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 PRSS2P07478 247 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 PSMB2P49721 201 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 MLST8Q9BVC4 326 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
CDH1-210ENST00000566612 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
CDH1-210ENST00000566612 ORAOV1Q8WV07 137 aa9□□□□□ -0.97
CDH1-210ENST00000566612 SIRPDQ9H106 197 aa9□□□□□ -0.97
CDH1-210ENST00000566612 TNRC6BQ9UPQ9 1833 aaKnown RBP9□□□□□ -0.97
CDH1-210ENST00000566612 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
CDH1-210ENST00000566612 TNFRSF13BO14836 293 aaPredicted RBP9□□□□□ -0.97
CDH1-210ENST00000566612 PRB1P04280 392 aa9□□□□□ -0.97
CDH1-210ENST00000566612 EMP1P54849 157 aa9□□□□□ -0.97
CDH1-210ENST00000566612 MBD6Q96DN6 1003 aa9□□□□□ -0.97
CDH1-210ENST00000566612 RAX2Q96IS3 184 aa9□□□□□ -0.97
CDH1-210ENST00000566612 LY6LH3BQJ8 138 aa9□□□□□ -0.97
CDH1-210ENST00000566612 EPG5Q9HCE0 2579 aa9□□□□□ -0.97
CDH1-210ENST00000566612 DMDP11532 3685 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
CDH1-210ENST00000566612 ZNF747Q9BV97 191 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 ESDP10768 282 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 LMO4P61968 165 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 ZNF462Q96JM2 2506 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 NDUFS8O00217 210 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 PPP1R17O96001 155 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
CDH1-210ENST00000566612 DPH3P1Q9H4G8 78 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms