RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 Q9H3A6 140 aa13.97□□□□□ -0.17
CLN6-207ENST00000566347 A0A1W2PPQ1 181 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 Q8TAT8 98 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 VSIG2Q96IQ7 327 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 ST6GAL2Q96JF0 529 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 SMIM3Q9BZL3 60 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 MBD2Q9UBB5 411 aa13.96□□□□□ -0.17
CLN6-207ENST00000566347 ZNF415Q09FC8 603 aa13.95□□□□□ -0.18
CLN6-207ENST00000566347 ZNF266Q14584 549 aa13.95□□□□□ -0.18
CLN6-207ENST00000566347 TP53TG3Q9ULZ0 132 aa13.95□□□□□ -0.18
CLN6-207ENST00000566347 LENEPQ9Y5L5 61 aa13.95□□□□□ -0.18
CLN6-207ENST00000566347 PCLOQ9Y6V0 5065 aa13.94□□□□□ -0.18
CLN6-207ENST00000566347 A0A096LPF7 62 aa13.94□□□□□ -0.18
CLN6-207ENST00000566347 DIRC3C9JPN6 131 aa13.93□□□□□ -0.18
CLN6-207ENST00000566347 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
CLN6-207ENST00000566347 SLAQ13239 276 aa13.93□□□□□ -0.18
CLN6-207ENST00000566347 Q6ZQT7 251 aa13.93□□□□□ -0.18
CLN6-207ENST00000566347 BATF3Q9NR55 127 aa13.93□□□□□ -0.18
CLN6-207ENST00000566347 MRPL16Q9NX20 251 aaKnown RBP13.93□□□□□ -0.18
CLN6-207ENST00000566347 C16orf90A8MZG2 172 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 PAX4O43316 350 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 ACOT6Q3I5F7 207 aaPredicted RBP13.92□□□□□ -0.18
CLN6-207ENST00000566347 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 KRTAP1-5Q9BYS1 174 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 OTORQ9NRC9 128 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 ICOSQ9Y6W8 199 aa13.92□□□□□ -0.18
CLN6-207ENST00000566347 Q6AWC8 147 aa13.91□□□□□ -0.18
CLN6-207ENST00000566347 PQLC2Q6ZP29 291 aa13.91□□□□□ -0.18
CLN6-207ENST00000566347 CMTM2Q8TAZ6 248 aa13.91□□□□□ -0.18
CLN6-207ENST00000566347 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
CLN6-207ENST00000566347 A0A1W2PPV4 95 aa13.9□□□□□ -0.18
CLN6-207ENST00000566347 IGHV3-53P01767 116 aa13.9□□□□□ -0.18
CLN6-207ENST00000566347 MUC21Q5SSG8 566 aa13.9□□□□□ -0.18
CLN6-207ENST00000566347 HYLS1Q96M11 299 aa13.9□□□□□ -0.18
CLN6-207ENST00000566347 WFDC1Q9HC57 220 aa13.9□□□□□ -0.18
CLN6-207ENST00000566347 FAM159AQ6UWV7 190 aa13.89□□□□□ -0.19
CLN6-207ENST00000566347 ARL6IP6Q8N6S5 226 aa13.89□□□□□ -0.19
CLN6-207ENST00000566347 SPXQ9BT56 116 aa13.89□□□□□ -0.19
CLN6-207ENST00000566347 HHLA3Q9XRX5 114 aa13.89□□□□□ -0.19
CLN6-207ENST00000566347 TRGV11A0A075B6L2 103 aa13.88□□□□□ -0.19
CLN6-207ENST00000566347 PGPA6NDG6 321 aa13.88□□□□□ -0.19
CLN6-207ENST00000566347 RYR1P21817 5038 aa13.88□□□□□ -0.19
CLN6-207ENST00000566347 SIVA1O15304 175 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 CRYBA4P53673 196 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 FHL2Q14192 279 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 TMEM183BQ1AE95 376 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 TMEM183AQ8IXX5 376 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
CLN6-207ENST00000566347 EIF3GO75821 320 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLN6-207ENST00000566347 RAB2AP61019 212 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 MRPL23Q16540 153 aaKnown RBP13.86□□□□□ -0.19
CLN6-207ENST00000566347 TDRG1Q3Y452 100 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 OR10G4Q8NGN3 311 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 OR10G9Q8NGN4 311 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 OR10G7Q8NGN6 311 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 RASL10AQ92737 203 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 C8orf49Q96NF6 230 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 RPH3ALQ9UNE2 315 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 ALG5Q9Y673 324 aa13.86□□□□□ -0.19
CLN6-207ENST00000566347 TRGV4A0A0C4DH28 118 aa13.85□□□□□ -0.19
CLN6-207ENST00000566347 CDK2AP2O75956 126 aa13.85□□□□□ -0.19
CLN6-207ENST00000566347 NXPH4O95158 308 aa13.85□□□□□ -0.19
CLN6-207ENST00000566347 GOLT1AQ6ZVE7 132 aa13.85□□□□□ -0.19
CLN6-207ENST00000566347 IQCF2Q8IXL9 164 aa13.85□□□□□ -0.19
CLN6-207ENST00000566347 SPATA12Q7Z6I5 190 aa13.84□□□□□ -0.19
CLN6-207ENST00000566347 NAGKQ9UJ70 344 aa13.84□□□□□ -0.19
CLN6-207ENST00000566347 TRAV21A0A0B4J279 112 aa13.83□□□□□ -0.2
CLN6-207ENST00000566347 CDC34P49427 236 aaPredicted RBP13.83□□□□□ -0.2
CLN6-207ENST00000566347 NEGR1Q7Z3B1 354 aa13.83□□□□□ -0.2
CLN6-207ENST00000566347 OR2G3Q8NGZ4 309 aa13.83□□□□□ -0.2
CLN6-207ENST00000566347 LRP1BQ9NZR2 4599 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 SERTM2A0A1B0GWG4 89 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
CLN6-207ENST00000566347 PTTG1O95997 202 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 ARL14EPLP0DKL9 152 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 LINC00315P59091 139 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 LYPD5Q6UWN5 251 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
CLN6-207ENST00000566347 ZNF479Q96JC4 524 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 PSMG3Q9BT73 122 aaPredicted RBP13.82□□□□□ -0.2
CLN6-207ENST00000566347 TREM1Q9NP99 234 aa13.82□□□□□ -0.2
CLN6-207ENST00000566347 HSPG2P98160 4391 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 SFTA3P0C7M3 94 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 SRIP30626 198 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 HSD17B11Q8NBQ5 300 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 AQP10Q96PS8 301 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 MED28Q9H204 178 aa13.81□□□□□ -0.2
CLN6-207ENST00000566347 TRAV8-1A0A0A6YYK1 113 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 TRAV4A0A0B4J268 109 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 M0R2P5 195 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 MBP02144 154 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 ORM1P02763 201 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 KCNS1Q96KK3 526 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 NDFIP1Q9BT67 221 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 SDF2L1Q9HCN8 221 aa13.8□□□□□ -0.2
CLN6-207ENST00000566347 IGHV3-16A0A0C4DH30 117 aa13.79□□□□□ -0.2
CLN6-207ENST00000566347 F6UZH7 168 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms