RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TRAV6A0A075B6T7 132 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DEFB131BA0A096LNP1 70 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 A0A096LPF7 62 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TRAV8-2A0A0B4J237 113 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 A0A0J9YY99 117 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SMCO3A2RU48 225 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 FAM24AA6NFZ4 105 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CRYM-AS1A6NIL9 109 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SNRPGP15A8MWD9 76 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 H3BMM0 161 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 H3BMQ9 156 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 H3BQ15 152 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 H3BUA1 57 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 GABARAPH6UMI1 98 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 K7EMT4 169 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 M0R2Z0 102 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 NDUFA4O00483 81 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 HMGB3O15347 200 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 GNRH2O43555 120 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SSSCA1O60232 199 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 PITX3O75364 302 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CST7O76096 145 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 GABARAPO95166 117 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TNFAIP8O95379 198 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 IFNA10P01566 189 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 IGHV3-53P01767 116 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 C1QBP02746 253 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SMR3BP02814 79 aaPredicted RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 CD74P04233 296 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 IL4P05112 153 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR5G3P0C626 314 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 METTL15P1P0C7V9 234 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LINC00869P0C866 280 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 IGLC1P0CG04 106 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 HIST1H1BP16401 226 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 GALP22466 123 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CRYBB3P26998 211 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SLC6A1P30531 599 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR10J1P30954 320 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 RNASE4P34096 147 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 BTCP35070 178 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 BMI1P35226 326 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OPRK1P41145 380 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CBX5P45973 191 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 RPL5P46777 297 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 P2RY1P47900 373 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 AKR1C2P52895 323 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TAS2R46P59540 309 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DEFA3P59666 94 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SPCS3P61009 180 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SSTP61278 116 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 PRCDQ00LT1 54 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SLC38A11Q08AI6 406 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CBX3Q13185 183 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DHRS2Q13268 280 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR5I1Q13606 314 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 POU2AF1Q16633 256 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SPINK13Q1W4C9 94 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 KLK9Q2XQG4 91 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 KCTD21Q4G0X4 260 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 Q5BKY6 102 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 RNASE10Q5GAN6 216 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 NMSQ5H8A3 153 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 FAM222AQ5U5X8 452 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 FAM78BQ5VT40 261 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SPATA31B1PQ5VZV4 182 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 MIC13Q5XKP0 118 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LAMTOR1Q6IAA8 161 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LPCAT3Q6P1A2 487 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LINC00336Q6ZUF6 198 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 ACOT7LQ6ZUV0 252 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SLC16A13Q7RTY0 426 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LHFPL1Q86WI0 220 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 BAP18Q8IXM2 172 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 CMTM1Q8IZ96 169 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SLC38A6Q8IZM9 456 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR8I2Q8N0Y5 310 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 EXOC3-AS1Q8N2X6 119 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TCTEX1D1Q8N7M0 179 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 Q8NAQ8 132 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TMEM229BQ8NBD8 167 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 BPIFCQ8NFQ6 507 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR1P1Q8NH06 330 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR4X1Q8NH49 305 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 OR1S1Q8NH92 325 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 MCFD2Q8NI22 146 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 RNASE11Q8TAA1 199 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 ZFAND1Q8TCF1 268 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DEFB104AQ8WTQ1 72 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 Q8WTZ3 238 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 RAB2BQ8WUD1 216 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 BLNKQ8WV28 456 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 FCGR1BQ92637 280 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LSM10Q969L4 123 aaKnown RBP0.7□□□□□ -2.3
SMG1-212ENST00000566328 PPP1R14BQ96C90 147 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 ISOC1Q96CN7 298 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 DNAJC30Q96LL9 226 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 TMEM56Q96MV1 263 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 LINC01587Q99440 93 aa0.7□□□□□ -2.3
SMG1-212ENST00000566328 SEC22CQ9BRL7 303 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms