RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
RAB40C-210ENST00000566290 LINC00477Q96M19 166 aa12.69□□□□□ -0.38
RAB40C-210ENST00000566290 PACRGQ96M98 296 aaPredicted RBP12.69□□□□□ -0.38
RAB40C-210ENST00000566290 VGLL1Q99990 258 aa12.69□□□□□ -0.38
RAB40C-210ENST00000566290 IGHV3-66A0A0C4DH42 116 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 SH2D1AO60880 128 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 HIST1H1AQ02539 215 aaPredicted RBP12.68□□□□□ -0.38
RAB40C-210ENST00000566290 LINC01559Q495D7 138 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 DNLZQ5SXM8 178 aa12.68□□□□□ -0.38
RAB40C-210ENST00000566290 TRAV2A0A0B4J234 112 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 A0A1B0GUS0 222 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 CTRLP40313 264 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 KLF5Q13887 457 aaPredicted RBP12.67□□□□□ -0.38
RAB40C-210ENST00000566290 TM4SF20Q53R12 229 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 APRG1Q8IVJ8 170 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
RAB40C-210ENST00000566290 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 IGHV3-49A0A0A0MS15 119 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
RAB40C-210ENST00000566290 PRAC2D3DTV9 90 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 ID1P41134 155 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 AKR1D1P51857 326 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
RAB40C-210ENST00000566290 RNF182Q8N6D2 247 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 ODF3Q96PU9 254 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 CITED1Q99966 193 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 CNFNQ9BYD5 112 aa12.66□□□□□ -0.38
RAB40C-210ENST00000566290 IGHV4OR15-8A0A075B7B6 117 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 A0A087WW49 117 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 A0A1B0GUT8 65 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 TMEM189A5PLL7 270 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 CRISP2P16562 243 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 S100A2P29034 98 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
RAB40C-210ENST00000566290 RIGQ13278 110 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 TCF24Q7RTU0 167 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 FAM19A4Q96LR4 140 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 GPR61Q9BZJ8 451 aa12.65□□□□□ -0.38
RAB40C-210ENST00000566290 APCSP02743 223 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 IGFL4Q6B9Z1 124 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 ZNF493Q6ZR52 646 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 ZNF738Q8NE65 137 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 OR10J6PQ8NGY7 276 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 Q8TAT8 98 aa12.64□□□□□ -0.39
RAB40C-210ENST00000566290 LINC01619G3V211 115 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 M0QZ24 198 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 FRMD6-AS1P0C7T7 363 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 HIST1H2BLQ99880 126 aa12.63□□□□□ -0.39
RAB40C-210ENST00000566290 C2orf70A6NJV1 201 aa12.62□□□□□ -0.39
RAB40C-210ENST00000566290 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
RAB40C-210ENST00000566290 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
RAB40C-210ENST00000566290 TMEM18Q96B42 140 aa12.62□□□□□ -0.39
RAB40C-210ENST00000566290 PEMTQ9UBM1 199 aa12.62□□□□□ -0.39
RAB40C-210ENST00000566290 F2Z2F3 143 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 K7EQG2 157 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 ERCC8Q13216 396 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 SLAQ13239 276 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 FHL3Q13643 280 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 GDF5OSQ5U4N7 250 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
RAB40C-210ENST00000566290 AMBPP02760 352 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 SYNJ2BPP57105 145 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 RAB4BP61018 213 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 PAFAH1B2P68402 229 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 C11orf44Q8N8P7 122 aa12.6□□□□□ -0.39
RAB40C-210ENST00000566290 SPINK4O60575 86 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 MED14OSP0DP75 135 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 ZFAND2AQ8N6M9 145 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 MS4A6AQ9H2W1 248 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 SIGLEC8Q9NYZ4 499 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 TP53TG3Q9ULZ0 132 aa12.59□□□□□ -0.39
RAB40C-210ENST00000566290 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
RAB40C-210ENST00000566290 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
RAB40C-210ENST00000566290 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
RAB40C-210ENST00000566290 OR1N2Q8NGR9 330 aa12.58□□□□□ -0.4
RAB40C-210ENST00000566290 C12orf57Q99622 126 aa12.58□□□□□ -0.4
RAB40C-210ENST00000566290 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
RAB40C-210ENST00000566290 LOC102724200A0A096LPH7 203 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-210ENST00000566290 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 A8MTW9 85 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 SRIP30626 198 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 LINC00310P59036 64 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 DPF1Q92782 380 aa12.57□□□□□ -0.4
RAB40C-210ENST00000566290 SSBP4Q9BWG4 385 aaPredicted RBP12.57□□□□□ -0.4
RAB40C-210ENST00000566290 IGHV4-4A0A075B6R2 117 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 KLLNB2CW77 178 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms