RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TRAV5A0A0B4J249 113 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 SLC17A3O00476 420 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 LEMD1Q68G75 181 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 SIGLEC15Q6ZMC9 328 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 BAGE3Q86Y29 109 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 TMEM256Q8N2U0 113 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 OR4B1Q8NGF8 309 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 FMC1Q96HJ9 113 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 MS4A6AQ9H2W1 248 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-206ENST00000565990 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
SF3B3-206ENST00000565990 GP9P14770 177 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 RPL7P18124 248 aaKnown RBP9.43□□□□□ -0.9
SF3B3-206ENST00000565990 Q8N1Y9 231 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 DCANP1Q8TF63 244 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 GFRA4Q9GZZ7 299 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 DNAH3Q8TD57 4116 aa9.43□□□□□ -0.9
SF3B3-206ENST00000565990 A0A087X0K7 114 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 K7EQG2 157 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 M0R143 59 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 SERF1AO75920 110 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 GPX1P07203 203 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 ARL6IP6Q8N6S5 226 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 ATG101Q9BSB4 218 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 SAMD10Q9BYL1 202 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
SF3B3-206ENST00000565990 C20orf202A1L168 122 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 SOCS3O14543 225 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-206ENST00000565990 LINC00310P59036 64 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 UBE2G1P62253 170 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
SF3B3-206ENST00000565990 OR5I1Q13606 314 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
SF3B3-206ENST00000565990 OR4C46A6NHA9 309 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-206ENST00000565990 A8MWL6 223 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF253O75346 499 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 APCSP02743 223 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-206ENST00000565990 MGST1P10620 155 aaKnown RBP9.4□□□□□ -0.9
SF3B3-206ENST00000565990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 Q6ZWC4 215 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 MLST8Q9BVC4 326 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
SF3B3-206ENST00000565990 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
SF3B3-206ENST00000565990 FBLL1A6NHQ2 334 aaKnown RBP9.39□□□□□ -0.91
SF3B3-206ENST00000565990 NUPR1O60356 82 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 ZNF324O75467 553 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-206ENST00000565990 CD7P09564 240 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 NBEAP1P0C6P0 100 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 VAMP8Q9BV40 100 aa9.39□□□□□ -0.91
SF3B3-206ENST00000565990 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 SERTM2A0A1B0GWG4 89 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 GRIFINA4D1Z8 144 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 A8MZ25 164 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 LTAP01374 205 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
SF3B3-206ENST00000565990 PMCHP20382 165 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
SF3B3-206ENST00000565990 WFDC3Q8IUB2 231 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 PRR25Q96S07 402 aa9.38□□□□□ -0.91
SF3B3-206ENST00000565990 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 A0A1B0GW15 77 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 C19orf71A6NCJ1 209 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 NPIPB6E9PJ23 425 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 PYYP10082 97 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 TFPI2P48307 235 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 NHLRC2Q8NBF2 726 aa9.37□□□□□ -0.91
SF3B3-206ENST00000565990 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
SF3B3-206ENST00000565990 PGPA6NDG6 321 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 SRIP30626 198 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 AMTP48728 403 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 FOXA3P55318 350 aaPredicted RBP9.36□□□□□ -0.91
SF3B3-206ENST00000565990 PDE6HQ13956 83 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 Q6AWC8 147 aa9.36□□□□□ -0.91
SF3B3-206ENST00000565990 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms