RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 LINC00477Q96M19 166 aa13.34□□□□□ -0.27
SPSB3-207ENST00000565550 ODF3Q96PU9 254 aa13.34□□□□□ -0.27
SPSB3-207ENST00000565550 ZNF492Q9P255 531 aa13.34□□□□□ -0.27
SPSB3-207ENST00000565550 GGTLC3B5MD39 225 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 TSPOP30536 169 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 TMEM78Q5T7P6 136 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 GOLT1AQ6ZVE7 132 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 TMED6Q8WW62 240 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 SGK494Q96LW2 274 aa13.33□□□□□ -0.28
SPSB3-207ENST00000565550 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 A0A1B0GV50 99 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 PLAC8L1A1L4L8 177 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 MAP1LC3B2A6NCE7 125 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 KLLNB2CW77 178 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
SPSB3-207ENST00000565550 SEC11BP0C7V7 166 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 UBE2G2P60604 165 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 MAP1LC3BQ9GZQ8 125 aa13.32□□□□□ -0.28
SPSB3-207ENST00000565550 C7orf71A4D174 169 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 LYRM9A8MSI8 78 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 RNASE4P34096 147 aaKnown RBP13.31□□□□□ -0.28
SPSB3-207ENST00000565550 ZNF138P52744 262 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 C15orf53Q8NAA6 179 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SPSB3-207ENST00000565550 RBAKDNA6NC62 111 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 DEFB130BP0DP73 79 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 DEFB130AP0DP74 79 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
SPSB3-207ENST00000565550 CRISP2P16562 243 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 SUMO1P63165 101 aaKnown RBP13.3□□□□□ -0.28
SPSB3-207ENST00000565550 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 TMEM256Q8N2U0 113 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 STOML3Q8TAV4 291 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 RXFP4Q8TDU9 374 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 PKD1P98161 4303 aa13.3□□□□□ -0.28
SPSB3-207ENST00000565550 GPX1P07203 203 aa13.29□□□□□ -0.28
SPSB3-207ENST00000565550 TAS2R60P59551 318 aa13.29□□□□□ -0.28
SPSB3-207ENST00000565550 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
SPSB3-207ENST00000565550 C1orf134Q5TEV5 83 aa13.29□□□□□ -0.28
SPSB3-207ENST00000565550 TVP23CQ96ET8 276 aa13.29□□□□□ -0.28
SPSB3-207ENST00000565550 H7BYZ3 331 aa13.28□□□□□ -0.28
SPSB3-207ENST00000565550 ZNF324O75467 553 aaPredicted RBP13.28□□□□□ -0.28
SPSB3-207ENST00000565550 C20orf144Q9BQM9 153 aa13.28□□□□□ -0.28
SPSB3-207ENST00000565550 F5H768 121 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 F6UZH7 168 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 TCRAP04437 139 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 FAM3BP58499 235 aaPredicted RBP13.27□□□□□ -0.29
SPSB3-207ENST00000565550 C5orf17Q8NAS9 161 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 RNASE8Q8TDE3 154 aaKnown RBP13.27□□□□□ -0.29
SPSB3-207ENST00000565550 ATG101Q9BSB4 218 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
SPSB3-207ENST00000565550 A0A1W2PRE2 83 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 FAM74A7A6NL05 159 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 NACAE9PAV3 2078 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
SPSB3-207ENST00000565550 SLC51BQ86UW2 128 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 SFT2D1Q8WV19 159 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
SPSB3-207ENST00000565550 UMAD1C9J7I0 102 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 NUDT3O95989 172 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 TMEM263Q8WUH6 116 aaKnown RBP13.25□□□□□ -0.29
SPSB3-207ENST00000565550 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 C16orf74Q96GX8 76 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 LINC00479Q96M42 142 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
SPSB3-207ENST00000565550 TRAV34A0A0B4J273 112 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 CBY3A6NI87 242 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 ATP5G1P05496 136 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 ATP5G3P48201 142 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 MUC21Q5SSG8 566 aa13.24□□□□□ -0.29
SPSB3-207ENST00000565550 RYR1P21817 5038 aa13.23□□□□□ -0.29
SPSB3-207ENST00000565550 NMBP08949 121 aa13.23□□□□□ -0.29
SPSB3-207ENST00000565550 PYGO2Q9BRQ0 406 aa13.23□□□□□ -0.29
SPSB3-207ENST00000565550 NOP10Q9NPE3 64 aaKnown RBP13.23□□□□□ -0.29
SPSB3-207ENST00000565550 PAGE4O60829 102 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 IFNA7P01567 189 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 CCL20P78556 96 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 PRNTQ86SH4 94 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 ZNRF2Q8NHG8 242 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
SPSB3-207ENST00000565550 TIMM8BQ9Y5J9 83 aaPredicted RBP13.22□□□□□ -0.29
SPSB3-207ENST00000565550 MUC4Q99102 2169 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 TRBV7-9A0A0J9YWB2 115 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 NBDYA0A0U1RRE5 68 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
SPSB3-207ENST00000565550 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 DPPA3Q6W0C5 159 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 CCDC28AQ8IWP9 274 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 C11orf72Q8NBR9 251 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 TREM1Q9NP99 234 aa13.21□□□□□ -0.29
SPSB3-207ENST00000565550 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms