RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 RAB24Q969Q5 203 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 MRPL53Q96EL3 112 aaKnown RBP6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 PHYHIPLQ96FC7 376 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 SLC25A2Q9BXI2 301 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 ZNF331Q9NQX6 463 aaPredicted RBP6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 TMEM167BQ9NRX6 74 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 TRBV19A0A075B6N1 114 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 DUSP14O95147 198 aaKnown RBP6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 RAB2AP61019 212 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 CD300CQ08708 224 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 FAM74A1Q5RGS3 127 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 EBLN2Q6P2I7 272 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 FAM122CQ6P4D5 195 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 FOXI2Q6ZQN5 318 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 SUN5Q8TC36 379 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 RXFP4Q8TDU9 374 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 LINC00052Q96N35 136 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 NKX6-2Q9C056 277 aaPredicted RBP6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 SH3BGRL3Q9H299 93 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
VPS9D1-205ENST00000565452 ZNF705GA8MUZ8 300 aaPredicted RBP6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 H3BQ15 152 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 SIVA1O15304 175 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 GDF5OSQ5U4N7 250 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 MBD3L1Q8WWY6 194 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 FXYD5Q96DB9 178 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
VPS9D1-205ENST00000565452 TRAV9-2A0A087WT02 112 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 TRAV26-1A0A087WT03 109 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 IGLV5-52A0A0A0MRZ9 124 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 TRAV8-2A0A0B4J237 113 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 DNAH10OSP0CZ25 163 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 PYYP10082 97 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 TSPOP30536 169 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 CSN1S1P47710 185 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 SULT1A2P50226 295 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 PPT1P50897 306 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 UBE2L3P68036 154 aaKnown RBP6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 LINC00528Q8N1L1 170 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 TMED6Q8WW62 240 aa6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
VPS9D1-205ENST00000565452 TRAV1-1A0A0B4J248 108 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 A0A0J9YX75 114 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 A0A1W2PRE2 83 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 A8MTW9 85 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 NDUFB4O95168 129 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 H2AFB1P0C5Y9 115 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 ARL14EPLP0DKL9 152 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 GCHFRP30047 84 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 RANP62826 216 aaKnown RBP6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 RPUSD4Q96CM3 377 aaKnown RBP6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 LINC00477Q96M19 166 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 OTORQ9NRC9 128 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 ARL2-SNX15V9GYD0 113 aa6.17□□□□□ -1.42
VPS9D1-205ENST00000565452 A0A0J9YY99 117 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 SERTM2A0A1B0GWG4 89 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 RBAKDNA6NC62 111 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 MAP1LC3B2A6NCE7 125 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 PGPA6NDG6 321 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 H3BNG1 76 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 PRM2P04554 102 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 SLC25A5P05141 298 aaKnown RBP6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 OR10J4P0C629 311 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 FHITP49789 147 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 DEFB1P60022 68 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 ZNF726P1Q15940 193 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 OR8A1Q8NGG7 326 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 SFT2D1Q8WV19 159 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 TXNDC17Q9BRA2 123 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 MAP1LC3BQ9GZQ8 125 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 PPP1R14DQ9NXH3 145 aa6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 TIMM8BQ9Y5J9 83 aaPredicted RBP6.16□□□□□ -1.42
VPS9D1-205ENST00000565452 TRBV7-9A0A0J9YWB2 115 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 FBLL1A6NHQ2 334 aaKnown RBP6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 K7EQM0 130 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 SLC17A3O00476 420 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 HMGB3O15347 200 aaKnown RBP6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 AZU1P20160 251 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 IGFL4Q6B9Z1 124 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 C9orf47Q6ZRZ4 202 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 CMTM2Q8TAZ6 248 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 FAM213BQ8TBF2 198 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 TCEAL7Q9BRU2 100 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 FAM30AQ9NZY2 134 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.42
VPS9D1-205ENST00000565452 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
VPS9D1-205ENST00000565452 F6UZH7 168 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms