RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	SLC25A15	Q9Y619	301 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	PCDH15	Q96QU1	1955 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	CHD7	Q9P2D1	2997 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGLV3-32	A0A0A0MS00	114 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRAV26-2	A0A0B4J265	109 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970		A0A0J9YY99	117 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM30CP	A0ZSE6	113 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	SPINT2	O43291	252 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	FCGR3B	O75015	233 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	PPP1R17	O96001	155 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	ARMS2	P0C7Q2	107 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	LAGE3	Q14657	143 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	C3orf56	Q8N813	242 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	SAP25	Q8TEE9	199 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	C1orf159	Q96HA4	380 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	DEFB118	Q96PH6	123 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	DSCR8	Q96T75	97 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	S1PR3	Q99500	378 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM14B	Q9NUH8	114 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	RIF1	Q5UIP0	2472 aa	Known RBP	4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	GOLGA4	Q13439	2230 aa	Known RBP	4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	CACNA1H	O95180	2353 aa		4.89	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRIO	O75962	3097 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	DNAH12	Q6ZR08	3092 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRBV19	A0A075B6N1	114 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	C5orf63	A6NC05	138 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	SDHAF1	A6NFY7	115 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970		H0YIG0	161 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	OVOL3	O00110	214 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	LST1	O00453	97 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	WNT9B	O14905	357 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	CXCL13	O43927	109 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	OXT	P01178	125 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	CLPS	P04118	112 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	TCF15	Q12870	199 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	CD164L2	Q6UWJ8	174 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	STH	Q8IWL8	128 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM263	Q8WUH6	116 aa	Known RBP	4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	SRSF12	Q8WXF0	261 aa	Known RBP	4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	C16orf92	Q96LL3	132 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	GPHA2	Q96T91	129 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	OVOL2	Q9BRP0	275 aa		4.88	□□□□□ -1.63
PTPN9-204	ENST00000564970	USP9X	Q93008	2570 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRBV7-1	A0A0A6YYK4	115 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRAV3	A0A0B4J244	114 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGHV1-69D	A0A0B4J2H0	117 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TRBV10-3	A0A0K0K1G6	114 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	LOC389332	A0A1B0GUA5	103 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	C17orf98	A8MV24	154 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970		H7C423	109 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	SCRG1	O75711	98 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	WISP1	O95388	367 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	STATH	P02808	62 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGKV3-11	P04433	115 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	CD69	Q07108	199 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM30B	Q3MIR4	351 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	C4orf48	Q5BLP8	95 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM92	Q6UXU6	159 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	MRPL55	Q7Z7F7	128 aa	Known RBP	4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	THAP8	Q8NA92	274 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	MDS2	Q8NDY4	140 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	FLVCR1-AS1	Q8TAF5	88 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM243	Q9BU79	118 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	ZNF576	Q9H609	170 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	C16orf95	Q9H693	158 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	LTBP2	Q14767	1821 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	AGRN	O00468	2067 aa		4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	HEATR1	Q9H583	2144 aa	Known RBP	4.87	□□□□□ -1.63
PTPN9-204	ENST00000564970	COL5A1	P20908	1838 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	PLAC8L1	A1L4L8	177 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	C11orf86	A6NJI1	115 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	LYRM9	A8MSI8	78 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	TGFBR3L	H3BV60	316 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970		J3QT63	122 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	GP9	P14770	177 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	CD40	P25942	277 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	GFER	P55789	205 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	PRCD	Q00LT1	54 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	GUSBP11	Q6P575	273 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	DCANP1	Q8TF63	244 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	TTTY13	Q9BZ97	58 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	FSCN3	Q9NQT6	498 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	SPEG	Q15772	3267 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	FAM186A	A6NE01	2351 aa		4.86	□□□□□ -1.63
PTPN9-204	ENST00000564970	LRP4	O75096	1905 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	TANC2	Q9HCD6	1990 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	ZZEF1	O43149	2961 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGLV2-18	A0A075B6J9	118 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970		A0A1W2PQU0	124 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM223	A0PJW6	202 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970		Q1RN00	199 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	PLXDC1	Q8IUK5	500 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	FAM216B	Q8N7L0	139 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	BRK1	Q8WUW1	75 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	PLPPR2	Q96GM1	343 aa		4.85	□□□□□ -1.63
PTPN9-204	ENST00000564970	EMC6	Q9BV81	110 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms