RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PRELID3AQ96N28 172 aa0.47□□□□□ -2.33
CHD9-211ENST00000564600 CIB3Q96Q77 187 aaPredicted RBP0.47□□□□□ -2.33
CHD9-211ENST00000564600 OR4C12Q96R67 309 aa0.47□□□□□ -2.33
CHD9-211ENST00000564600 TSC22D3Q99576 134 aa0.47□□□□□ -2.33
CHD9-211ENST00000564600 COA4Q9NYJ1 87 aa0.47□□□□□ -2.33
CHD9-211ENST00000564600 UNC13CQ8NB66 2214 aa0.47□□□□□ -2.33
CHD9-211ENST00000564600 TCOF1Q13428 1488 aaKnown RBP0.47□□□□□ -2.33
CHD9-211ENST00000564600 CASP8AP2Q9UKL3 1982 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 PBRM1Q86U86 1689 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 NUP210Q8TEM1 1887 aaPredicted RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 IGHV1-24A0A0C4DH33 117 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 TRBV27A0A0K0K1C4 114 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 A0A1W2PPB8 328 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 A0A1W2PPM0 123 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 A0A1W2PRS3 328 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 KIR3DP1A8MWS1 328 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 CCDC179H3BU77 68 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 NCR3O14931 201 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 UQCRQO14949 82 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 DNAL4O96015 105 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 IGLV3-1P01715 115 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 CXCL1P09341 107 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 COX4I1P13073 169 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 FABP4P15090 132 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 KDELR1P24390 212 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 G0S2P27469 103 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 S100A11P31949 105 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 SNRPD3P62318 126 aaKnown RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 PLGLB1Q02325 96 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 RHOHQ15669 191 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 HSD17B12Q53GQ0 312 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 CASC2Q6XLA1 102 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 C10orf111Q8N326 155 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 OR51A4Q8NGJ6 313 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 CCDC115Q96NT0 180 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 PSMG3Q9BT73 122 aaPredicted RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 OTORQ9NRC9 128 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 COPZ2Q9P299 210 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 COMMD3Q9UBI1 195 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 SCP2D1Q9UJQ7 156 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 ERG28Q9UKR5 140 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 N4BP2Q86UW6 1770 aaPredicted RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 CHD3Q12873 2000 aaKnown RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 KMT2DO14686 5537 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 BCL9O00512 1426 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 NAIPQ13075 1403 aa0.46□□□□□ -2.34
CHD9-211ENST00000564600 MYO5AQ9Y4I1 1855 aaKnown RBP0.46□□□□□ -2.34
CHD9-211ENST00000564600 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 TRAV23DV6A0A075B6W5 121 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 LOC107984156A0A0G2JMH3 177 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 C3orf85A0A1B0GTC6 90 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 H7BYZ3 331 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 J3KT08 172 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 K7EIL1 84 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 K7ERU9 68 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 OR2H2O95918 312 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 IFNA17P01571 189 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 IGHV3-30P01768 117 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 CD2P06729 351 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 SCTP09683 121 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 IGHV3-30-5P0DP03 117 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 PIPP12273 146 aaPredicted RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 ZNF25P17030 456 aaPredicted RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 EVI2AP22794 236 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 RPL22P35268 128 aaKnown RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 POLR2JP52435 117 aaKnown RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 MAXP61244 160 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 PCBD1P61457 104 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 B2MP61769 119 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 RRAS2P62070 204 aaPredicted RBP0.45□□□□□ -2.34
CHD9-211ENST00000564600 S100A12P80511 92 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 SPINK13Q1W4C9 94 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 SPRNQ5BIV9 151 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 FAM74A4Q5TZK3 123 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 LINC01545Q5VT33 79 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 SCIMPQ6UWF3 145 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 NDUFA11Q86Y39 141 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 ARL17AQ8IVW1 177 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 KCNRGQ8N5I3 272 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 Q8N6K4 173 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 TCTEX1D1Q8N7M0 179 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 MORN4Q8NDC4 146 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 TSTD1Q8NFU3 115 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 OR5A2Q8NGI9 324 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 THEM6Q8WUY1 208 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 PPDPFLQ8WWR9 84 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 WFDC10AQ9H1F0 79 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 NIT2Q9NQR4 276 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 TAS2R8Q9NYW2 309 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 CCDC167Q9P0B6 97 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 MPC1Q9Y5U8 109 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 A2MP01023 1474 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 JMJD1CQ15652 2540 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 HIVEP3Q5T1R4 2406 aa0.45□□□□□ -2.34
CHD9-211ENST00000564600 TET1Q8NFU7 2136 aa0.44□□□□□ -2.34
CHD9-211ENST00000564600 SONP18583 2426 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms