RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ETV6P41212 452 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 ASB16-AS1Q495Z4 193 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 Q6ZSA8 131 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 PATE1Q8WXA2 126 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 ARL11Q969Q4 196 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 LINC00052Q96N35 136 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 C2orf88Q9BSF0 95 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 MPC1Q9Y5U8 109 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 ERCC6Q03468 1493 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
UBR1-205ENST00000564540 KDM6AO15550 1401 aaPredicted RBP1.23□□□□□ -2.21
UBR1-205ENST00000564540 TNS3Q68CZ2 1445 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 MYLKQ15746 1914 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 MED13Q9UHV7 2174 aa1.23□□□□□ -2.21
UBR1-205ENST00000564540 SCN3AQ9NY46 2000 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 PCDH15Q96QU1 1955 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 IGHV1-24A0A0C4DH33 117 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 HYPMO75409 117 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 EMX2Q04743 252 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 GKN2Q86XP6 184 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 C4orf3Q8WVX3 66 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 CIB3Q96Q77 187 aaPredicted RBP1.22□□□□□ -2.21
UBR1-205ENST00000564540 CEP192Q8TEP8 1941 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 USP54Q70EL1 1684 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 PTPRGP23470 1445 aa1.22□□□□□ -2.21
UBR1-205ENST00000564540 ROCK2O75116 1388 aaKnown RBP1.21□□□□□ -2.21
UBR1-205ENST00000564540 FREM1Q5H8C1 2179 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 MYH1P12882 1939 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 TRGV2A0A075B6R0 118 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 EDF1O60869 148 aaKnown RBP1.21□□□□□ -2.22
UBR1-205ENST00000564540 PITX3O75364 302 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 IGF2P01344 180 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 PLGLB1Q02325 96 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.21□□□□□ -2.22
UBR1-205ENST00000564540 IZUMO2Q6UXV1 221 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 CASC2Q6XLA1 102 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 C5orf17Q8NAS9 161 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 OR10AG1Q8NH19 301 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 CGREF1Q99674 301 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 CDC42SE1Q9NRR8 79 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 ORMDL1Q9P0S3 153 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 FGD6Q6ZV73 1430 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 BRWD1Q9NSI6 2320 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 MED12LQ86YW9 2145 aa1.21□□□□□ -2.22
UBR1-205ENST00000564540 WDR97A6NE52 1622 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 PNMA8CA0A1B0GUJ8 204 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 LOC100130705A0A1B0GUX0 176 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 FAM25AB3EWG3 89 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 FAM25CB3EWG5 89 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 FAM25GB3EWG6 89 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 F8W1H4 67 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 M0R2P5 195 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 MRPS14O60783 128 aaKnown RBP1.2□□□□□ -2.22
UBR1-205ENST00000564540 RBP4P02753 201 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 COX7CP15954 63 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
UBR1-205ENST00000564540 TMEM191AQ9H0A3 160 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 KLK9Q9UKQ9 250 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 LAMB2P55268 1798 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 RTTNQ86VV8 2226 aa1.2□□□□□ -2.22
UBR1-205ENST00000564540 FREM3P0C091 2139 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 A0A0G2JMM0 328 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 TRBV6-4A0A1B0GX49 114 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 A0A1W2PPB8 328 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 IFITM5A6NNB3 132 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 KIR3DP1A8MWS1 328 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 CDC42EP2O14613 210 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 PHLPP1O60346 1717 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 IGHV3-33P01772 117 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 APOC1P02654 83 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 PYYP10082 97 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 FAM74A1Q5RGS3 127 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 ATP11AUNQ6ZP68 121 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 DPH3Q96FX2 82 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 SMIM7Q9BQ49 75 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 SAR1AQ9NR31 198 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 FOCADQ5VW36 1801 aa1.19□□□□□ -2.22
UBR1-205ENST00000564540 HELZP42694 1942 aaKnown RBP1.19□□□□□ -2.22
UBR1-205ENST00000564540 GRIN2AQ12879 1464 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 CECR2Q9BXF3 1484 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 FAM92AA1XBS5 289 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 CCL25O15444 150 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 NUPR1O60356 82 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 YPEL1O60688 119 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 CCSMST1Q4G0I0 132 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 MIC13Q5XKP0 118 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 Q6ZUT4 128 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 ATOH7Q8N100 152 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 TMEM2Q9UHN6 1383 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 HEATR1Q9H583 2144 aaKnown RBP1.18□□□□□ -2.22
UBR1-205ENST00000564540 WDR7Q9Y4E6 1490 aa1.18□□□□□ -2.22
UBR1-205ENST00000564540 ALPK2Q86TB3 2170 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 PTPRFP10586 1907 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 MYH6P13533 1939 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 MYH13Q9UKX3 1938 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 LOC110117498A0A087WWA1 95 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 H3BRM9 83 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 M0R2N4 97 aa1.17□□□□□ -2.22
UBR1-205ENST00000564540 HCRTO43612 131 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms