RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 CD5LO43866 347 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 TRBV12-3P01733 135 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 MRPL53Q96EL3 112 aaKnown RBP12.68□□□□□ -0.38
CCNF-204ENST00000564333 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 VPS13CQ709C8 3753 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 CSN3P07498 182 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 BLCAPP62952 87 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 SRSF2Q01130 221 aaKnown RBP12.68□□□□□ -0.38
CCNF-204ENST00000564333 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
CCNF-204ENST00000564333 NDUFA4O00483 81 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 PF4V1P10720 104 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 ZNF138P52744 262 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 FAM104BQ5XKR9 115 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 Q6ZS46 218 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 GLMPQ8WWB7 406 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
CCNF-204ENST00000564333 USP9XQ93008 2570 aaPredicted RBP12.67□□□□□ -0.38
CCNF-204ENST00000564333 A0A096LNT2 108 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 SEC11AP67812 179 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 LGALS9BQ3B8N2 356 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 IL17RELQ6ZVW7 336 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 FER1L6-AS1Q8NA97 138 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 ZFHX3Q15911 3703 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 A1L4Q6 167 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 TMEM213A2RRL7 107 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 TAX1BP3O14907 124 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 IGHV3-11P01762 117 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 PRELID3AQ96N28 172 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 TENM4Q6N022 2769 aa12.66□□□□□ -0.38
CCNF-204ENST00000564333 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
CCNF-204ENST00000564333 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCNF-204ENST00000564333 KLK15Q9H2R5 256 aa12.65□□□□□ -0.38
CCNF-204ENST00000564333 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.38
CCNF-204ENST00000564333 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 C9orf139Q6ZV77 190 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
CCNF-204ENST00000564333 IGLV1-40P01703 118 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 ORM1P02763 201 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 CFHR3Q02985 330 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 LINC01559Q495D7 138 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 OR4X2Q8NGF9 303 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
CCNF-204ENST00000564333 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
CCNF-204ENST00000564333 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 D6R8Y8 96 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 H0Y8G0 127 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 J3QLI3 93 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 HBDP02042 147 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 PPBPP02775 128 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
CCNF-204ENST00000564333 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 MUC21Q5SSG8 566 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 LCNL1Q6ZST4 164 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
CCNF-204ENST00000564333 PEF1Q9UBV8 284 aaKnown RBP12.63□□□□□ -0.39
CCNF-204ENST00000564333 GCN1Q92616 2671 aaKnown RBP12.63□□□□□ -0.39
CCNF-204ENST00000564333 A0A0G2JLM5 398 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 SIVA1O15304 175 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 CDKN1BP46527 198 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.399e-6■■□□□ 12.6
CCNF-204ENST00000564333 PRSS47A8MTI9 375 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 C9orf47Q6ZRZ4 202 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 AMN1Q8IY45 258 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 OR9G4Q8NGQ1 327 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 PSMG3-AS1Q96PY0 264 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 CELSR1Q9NYQ6 3014 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 LRRK2Q5S007 2527 aa12.62□□□□□ -0.39
CCNF-204ENST00000564333 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
CCNF-204ENST00000564333 TWIST1Q15672 202 aa12.61□□□□□ -0.39
CCNF-204ENST00000564333 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
CCNF-204ENST00000564333 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
CCNF-204ENST00000564333 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
CCNF-204ENST00000564333 TGFAP01135 160 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 Q6ZVH6 145 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 C20orf173Q96LM9 149 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
CCNF-204ENST00000564333 A6NDN8 102 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 CKS2P33552 79 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 RBX1P62877 108 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 MRPL51Q4U2R6 128 aaKnown RBP12.6□□□□□ -0.39
CCNF-204ENST00000564333 TMEM97Q5BJF2 176 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 GPHB5Q86YW7 130 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 OR8A1Q8NGG7 326 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 CNFNQ9BYD5 112 aa12.6□□□□□ -0.39
CCNF-204ENST00000564333 PLA2G2AP14555 144 aa12.59□□□□□ -0.39
CCNF-204ENST00000564333 PCP4P48539 62 aa12.59□□□□□ -0.39
CCNF-204ENST00000564333 LOXL1Q08397 574 aaPredicted RBP12.59□□□□□ -0.39
CCNF-204ENST00000564333 RNASE8Q8TDE3 154 aaKnown RBP12.59□□□□□ -0.39
CCNF-204ENST00000564333 A0A096LNJ9 63 aa12.58□□□□□ -0.39
CCNF-204ENST00000564333 RNF223E7ERA6 249 aa12.58□□□□□ -0.39
CCNF-204ENST00000564333 SOCS3O14543 225 aa12.58□□□□□ -0.39
CCNF-204ENST00000564333 C2orf91Q6ZV80 131 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms