RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 GAGE12BA1L429 117 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 K7EQM0 130 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GAGE7O76087 117 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 RNF212Q495C1 297 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GOLT1AQ6ZVE7 132 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 VPS13DQ5THJ4 4388 aa13.99□□□□□ -0.17
CMTM3-207ENST00000564060 TCL1AP56279 114 aa13.98□□□□□ -0.17
CMTM3-207ENST00000564060 Q6AWC8 147 aa13.98□□□□□ -0.17
CMTM3-207ENST00000564060 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
CMTM3-207ENST00000564060 NDFIP1Q9BT67 221 aa13.98□□□□□ -0.17
CMTM3-207ENST00000564060 HMSDA8MTL9 139 aa13.97□□□□□ -0.17
CMTM3-207ENST00000564060 ZNF415Q09FC8 603 aa13.97□□□□□ -0.17
CMTM3-207ENST00000564060 FAM159AQ6UWV7 190 aa13.96□□□□□ -0.17
CMTM3-207ENST00000564060 KCNRGQ8N5I3 272 aa13.96□□□□□ -0.17
CMTM3-207ENST00000564060 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
CMTM3-207ENST00000564060 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 TRGV2A0A075B6R0 118 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 TRGV1A0A0A0MS02 117 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 A0A1W2PRE2 83 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 FBLL1A6NHQ2 334 aaKnown RBP13.95□□□□□ -0.18
CMTM3-207ENST00000564060 SMLR1H3BR10 107 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 TCRAP04437 139 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
CMTM3-207ENST00000564060 GNG5P63218 68 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 OR5I1Q13606 314 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 Q6ZTI0 123 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 ATG101Q9BSB4 218 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 TREM1Q9NP99 234 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 CYTL1Q9NRR1 136 aa13.95□□□□□ -0.18
CMTM3-207ENST00000564060 TRGV11A0A075B6L2 103 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 A0A0D9SG52 128 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 SPINK4O60575 86 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 NUDT3O95989 172 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 SUMO1P63165 101 aaKnown RBP13.94□□□□□ -0.18
CMTM3-207ENST00000564060 SSX7Q7RTT5 188 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 NKX6-2Q9C056 277 aaPredicted RBP13.94□□□□□ -0.18
CMTM3-207ENST00000564060 KLF12Q9Y4X4 402 aa13.94□□□□□ -0.18
CMTM3-207ENST00000564060 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 TRAV21A0A0B4J279 112 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 KANTRA0A1W2PQU2 76 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 MUC21Q5SSG8 566 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 CYB561D1Q8N8Q1 229 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 EPDR1Q9UM22 224 aa13.93□□□□□ -0.18
CMTM3-207ENST00000564060 MUC4Q99102 2169 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 GGTLC3B5MD39 225 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 H3BNG1 76 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 EIF5AP63241 154 aaKnown RBP13.92□□□□□ -0.18
CMTM3-207ENST00000564060 ZNF726P1Q15940 193 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 Q6ZQT7 251 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 STOML3Q8TAV4 291 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 TMPRSS5Q9H3S3 457 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 TP53TG3Q9ULZ0 132 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 DNAH6Q9C0G6 4158 aa13.92□□□□□ -0.18
CMTM3-207ENST00000564060 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 CCL18P55774 89 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 TDRG1Q3Y452 100 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 ZFP69Q49AA0 526 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 TMEM75Q8N9X5 138 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 NAGKQ9UJ70 344 aa13.91□□□□□ -0.18
CMTM3-207ENST00000564060 MAP1LC3B2A6NCE7 125 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 F6UZH7 168 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 BCL2L11O43521 198 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 SEC11BP0C7V7 166 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 HOXA5P20719 270 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 PPT1P50897 306 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 FLI1Q01543 452 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-207ENST00000564060 TMEM183BQ1AE95 376 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 TMEM183AQ8IXX5 376 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 KCNS1Q96KK3 526 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 SPXQ9BT56 116 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 ZNF471Q9BX82 626 aaPredicted RBP13.9□□□□□ -0.18
CMTM3-207ENST00000564060 MAP1LC3BQ9GZQ8 125 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 PSG8Q9UQ74 426 aa13.9□□□□□ -0.18
CMTM3-207ENST00000564060 UMAD1C9J7I0 102 aa13.89□□□□□ -0.19
CMTM3-207ENST00000564060 IFNA7P01567 189 aa13.89□□□□□ -0.19
CMTM3-207ENST00000564060 TVP23CQ96ET8 276 aa13.89□□□□□ -0.19
CMTM3-207ENST00000564060 SDF2L1Q9HCN8 221 aa13.89□□□□□ -0.19
CMTM3-207ENST00000564060 FGF8P55075 233 aaPredicted RBP13.88□□□□□ -0.19
CMTM3-207ENST00000564060 SAPCD1Q5SSQ6 148 aa13.88□□□□□ -0.19
CMTM3-207ENST00000564060 SGK494Q96LW2 274 aa13.88□□□□□ -0.19
CMTM3-207ENST00000564060 MRPL16Q9NX20 251 aaKnown RBP13.88□□□□□ -0.19
CMTM3-207ENST00000564060 A0A0J9YY99 117 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 PFDN1O60925 122 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 UBE2G2P60604 165 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 SLAQ13239 276 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 SMUG1Q53HV7 270 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 PRNTQ86SH4 94 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
CMTM3-207ENST00000564060 FAM74A7A6NL05 159 aa13.86□□□□□ -0.19
CMTM3-207ENST00000564060 LINC00336Q6ZUF6 198 aa13.86□□□□□ -0.19
CMTM3-207ENST00000564060 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
CMTM3-207ENST00000564060 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms