RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 NUDT3O95989 172 aa21.58■■□□□ 1.05
CMTM4-204ENST00000563952 GNG5P63218 68 aa21.58■■□□□ 1.05
CMTM4-204ENST00000563952 OR5I1Q13606 314 aa21.57■■□□□ 1.04
CMTM4-204ENST00000563952 ARPC5LQ9BPX5 153 aa21.57■■□□□ 1.04
CMTM4-204ENST00000563952 KLF12Q9Y4X4 402 aa21.57■■□□□ 1.04
CMTM4-204ENST00000563952 LENEPQ9Y5L5 61 aa21.57■■□□□ 1.04
CMTM4-204ENST00000563952 DNAH6Q9C0G6 4158 aa21.57■■□□□ 1.04
CMTM4-204ENST00000563952 TMED6Q8WW62 240 aa21.56■■□□□ 1.04
CMTM4-204ENST00000563952 TRGV1A0A0A0MS02 117 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 M0R2N4 97 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 CXorf1O96002 111 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 RNF212Q495C1 297 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 MUC21Q5SSG8 566 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 SSX7Q7RTT5 188 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 IQCF2Q8IXL9 164 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 ARL6IP6Q8N6S5 226 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 TMPRSS5Q9H3S3 457 aa21.55■■□□□ 1.04
CMTM4-204ENST00000563952 TCL1AP56279 114 aa21.54■■□□□ 1.04
CMTM4-204ENST00000563952 ST6GAL2Q96JF0 529 aa21.54■■□□□ 1.04
CMTM4-204ENST00000563952 ATG101Q9BSB4 218 aa21.54■■□□□ 1.04
CMTM4-204ENST00000563952 TRGV2A0A075B6R0 118 aa21.53■■□□□ 1.04
CMTM4-204ENST00000563952 TRAV8-1A0A0A6YYK1 113 aa21.53■■□□□ 1.04
CMTM4-204ENST00000563952 TAAR5O14804 337 aa21.53■■□□□ 1.04
CMTM4-204ENST00000563952 HOXA5P20719 270 aa21.53■■□□□ 1.04
CMTM4-204ENST00000563952 IBA57Q5T440 356 aaKnown RBP21.53■■□□□ 1.04
CMTM4-204ENST00000563952 SUN5Q8TC36 379 aa21.53■■□□□ 1.04
CMTM4-204ENST00000563952 IGLV2-18A0A075B6J9 118 aa21.52■■□□□ 1.04
CMTM4-204ENST00000563952 TMEM167BQ9NRX6 74 aa21.52■■□□□ 1.04
CMTM4-204ENST00000563952 TRAV26-1A0A087WT03 109 aa21.51■■□□□ 1.03
CMTM4-204ENST00000563952 Q6AWC8 147 aa21.51■■□□□ 1.03
CMTM4-204ENST00000563952 SGK494Q96LW2 274 aa21.51■■□□□ 1.03
CMTM4-204ENST00000563952 A0A0J9YY99 117 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 SPINK4O60575 86 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 ZNF726P1Q15940 193 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 AKR1C8PQ5T2L2 129 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 C5orf17Q8NAS9 161 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 CYTL1Q9NRR1 136 aa21.5■■□□□ 1.03
CMTM4-204ENST00000563952 F6UZH7 168 aa21.49■■□□□ 1.03
CMTM4-204ENST00000563952 ZNF415Q09FC8 603 aa21.49■■□□□ 1.03
CMTM4-204ENST00000563952 TREM1Q9NP99 234 aa21.49■■□□□ 1.03
CMTM4-204ENST00000563952 MRPL16Q9NX20 251 aaKnown RBP21.49■■□□□ 1.03
CMTM4-204ENST00000563952 NAGKQ9UJ70 344 aa21.49■■□□□ 1.03
CMTM4-204ENST00000563952 NACAE9PAV3 2078 aa21.48■■□□□ 1.03
CMTM4-204ENST00000563952 CTXND1A0A1B0GTU2 59 aa21.48■■□□□ 1.03
CMTM4-204ENST00000563952 TCRAP04437 139 aa21.48■■□□□ 1.03
CMTM4-204ENST00000563952 SUMO1P63165 101 aaKnown RBP21.48■■□□□ 1.03
CMTM4-204ENST00000563952 FAM159AQ6UWV7 190 aa21.48■■□□□ 1.03
CMTM4-204ENST00000563952 TVP23CQ96ET8 276 aa21.48■■□□□ 1.03
CMTM4-204ENST00000563952 GGTLC3B5MD39 225 aa21.47■■□□□ 1.03
CMTM4-204ENST00000563952 TMEM183BQ1AE95 376 aa21.47■■□□□ 1.03
CMTM4-204ENST00000563952 TMEM183AQ8IXX5 376 aa21.47■■□□□ 1.03
CMTM4-204ENST00000563952 DNAH10Q8IVF4 4471 aa21.47■■□□□ 1.03
CMTM4-204ENST00000563952 SERTM2A0A1B0GWG4 89 aa21.46■■□□□ 1.03
CMTM4-204ENST00000563952 K7EQM0 130 aa21.46■■□□□ 1.03
CMTM4-204ENST00000563952 MDFICQ9P1T7 246 aa21.46■■□□□ 1.03
CMTM4-204ENST00000563952 FRAS1Q86XX4 4008 aa21.45■■□□□ 1.03
CMTM4-204ENST00000563952 C18orf15Q96N68 181 aa21.45■■□□□ 1.02
CMTM4-204ENST00000563952 NDFIP1Q9BT67 221 aa21.45■■□□□ 1.02
CMTM4-204ENST00000563952 FGF8P55075 233 aaPredicted RBP21.44■■□□□ 1.02
CMTM4-204ENST00000563952 CCL18P55774 89 aa21.44■■□□□ 1.02
CMTM4-204ENST00000563952 FAM3BP58499 235 aaPredicted RBP21.44■■□□□ 1.02
CMTM4-204ENST00000563952 LGALS9BQ3B8N2 356 aa21.44■■□□□ 1.02
CMTM4-204ENST00000563952 KCNRGQ8N5I3 272 aa21.44■■□□□ 1.02
CMTM4-204ENST00000563952 EPDR1Q9UM22 224 aa21.44■■□□□ 1.02
CMTM4-204ENST00000563952 TRGV11A0A075B6L2 103 aa21.43■■□□□ 1.02
CMTM4-204ENST00000563952 TRAV21A0A0B4J279 112 aa21.43■■□□□ 1.02
CMTM4-204ENST00000563952 IGHV3-53P01767 116 aa21.43■■□□□ 1.02
CMTM4-204ENST00000563952 ZNF345Q14585 488 aa21.43■■□□□ 1.02
CMTM4-204ENST00000563952 OR11H4Q8NGC9 324 aa21.43■■□□□ 1.02
CMTM4-204ENST00000563952 UBE2G2P60604 165 aa21.42■■□□□ 1.02
CMTM4-204ENST00000563952 PSG8Q9UQ74 426 aa21.42■■□□□ 1.02
CMTM4-204ENST00000563952 A0A1W2PRE2 83 aa21.41■■□□□ 1.02
CMTM4-204ENST00000563952 CYB561D1Q8N8Q1 229 aa21.41■■□□□ 1.02
CMTM4-204ENST00000563952 LINC00588Q9Y4M8 146 aa21.41■■□□□ 1.02
CMTM4-204ENST00000563952 PRNTQ86SH4 94 aa21.4■■□□□ 1.02
CMTM4-204ENST00000563952 C8orf49Q96NF6 230 aa21.4■■□□□ 1.02
CMTM4-204ENST00000563952 MAP1LC3B2A6NCE7 125 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 HMSDA8MTL9 139 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 H3BNG1 76 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 GNRH2O43555 120 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 FLI1Q01543 452 aaPredicted RBP21.39■■□□□ 1.01
CMTM4-204ENST00000563952 TDRG1Q3Y452 100 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 Q6ZR54 194 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 MAP1LC3BQ9GZQ8 125 aa21.39■■□□□ 1.01
CMTM4-204ENST00000563952 IFNA7P01567 189 aa21.38■■□□□ 1.01
CMTM4-204ENST00000563952 IGLV2-11P01706 119 aa21.38■■□□□ 1.01
CMTM4-204ENST00000563952 VSIG2Q96IQ7 327 aa21.38■■□□□ 1.01
CMTM4-204ENST00000563952 SPXQ9BT56 116 aa21.38■■□□□ 1.01
CMTM4-204ENST00000563952 TMEM75Q8N9X5 138 aa21.37■■□□□ 1.01
CMTM4-204ENST00000563952 A0A0D9SG52 128 aa21.36■■□□□ 1.01
CMTM4-204ENST00000563952 LINC00336Q6ZUF6 198 aa21.36■■□□□ 1.01
CMTM4-204ENST00000563952 ZNRF2Q8NHG8 242 aa21.36■■□□□ 1.01
CMTM4-204ENST00000563952 SDF2L1Q9HCN8 221 aa21.36■■□□□ 1.01
CMTM4-204ENST00000563952 MUC4Q99102 2169 aa21.36■■□□□ 1.01
CMTM4-204ENST00000563952 IGHV3-16A0A0C4DH30 117 aa21.35■■□□□ 1.01
CMTM4-204ENST00000563952 KANTRA0A1W2PQU2 76 aa21.35■■□□□ 1.01
CMTM4-204ENST00000563952 GCGP01275 180 aa21.35■■□□□ 1.01
CMTM4-204ENST00000563952 TYMSP04818 313 aa21.35■■□□□ 1.01
CMTM4-204ENST00000563952 ZNF80P51504 273 aaPredicted RBP21.35■■□□□ 1.01
CMTM4-204ENST00000563952 LINC00479Q96M42 142 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms