RNA–Protein interactions for RNA: ENST00000563920.1

CBFA2T3-206, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 1,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-206ENST00000563920 HIST1H2BDP58876 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST1H2BCP62807 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 ZNF124Q15973 351 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST2H2BEQ16778 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 OR10J6PQ8NGY7 276 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST1H2BHQ93079 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST1H2BNQ99877 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 HIST1H2BMQ99879 126 aa13.04□□□□□ -0.32
CBFA2T3-206ENST00000563920 PHOX2AO14813 284 aa13.03□□□□□ -0.32
CBFA2T3-206ENST00000563920 HOXA5P20719 270 aa13.03□□□□□ -0.32
CBFA2T3-206ENST00000563920 KCNIP4Q6PIL6 250 aa13.03□□□□□ -0.32
CBFA2T3-206ENST00000563920 LINC00482Q8N8I6 264 aa13.03□□□□□ -0.32
CBFA2T3-206ENST00000563920 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
CBFA2T3-206ENST00000563920 SPINK4O60575 86 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 ZFAND2AQ8N6M9 145 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 GTSF1Q8WW33 167 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 DAZAP1Q96EP5 407 aaKnown RBP13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 PPP1R14DQ9NXH3 145 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 SIGLEC8Q9NYZ4 499 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 C11orf21Q9P2W6 132 aa13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 ZNF256Q9Y2P7 627 aaPredicted RBP13.02□□□□□ -0.32
CBFA2T3-206ENST00000563920 J3KRW8 73 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 SAP30O75446 220 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 NDUFA6P56556 154 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 PAFAH1B2P68402 229 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 FAM162BQ5T6X4 162 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 FRZBQ92765 325 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
CBFA2T3-206ENST00000563920 A0A0J9YX75 114 aa13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 NEU1Q99519 415 aa13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 C12orf57Q99622 126 aa13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 NDFIP1Q9BT67 221 aa13.01□□□□□ -0.33
CBFA2T3-206ENST00000563920 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
CBFA2T3-206ENST00000563920 KNCNA6PVL3 124 aa13□□□□□ -0.33
CBFA2T3-206ENST00000563920 TYMSP04818 313 aa13□□□□□ -0.33
CBFA2T3-206ENST00000563920 DEFB131AP59861 70 aa13□□□□□ -0.33
CBFA2T3-206ENST00000563920 TSKUQ8WUA8 353 aa13□□□□□ -0.33
CBFA2T3-206ENST00000563920 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
CBFA2T3-206ENST00000563920 PF4P02776 101 aa12.99□□□□□ -0.33
CBFA2T3-206ENST00000563920 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
CBFA2T3-206ENST00000563920 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
CBFA2T3-206ENST00000563920 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
CBFA2T3-206ENST00000563920 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
CBFA2T3-206ENST00000563920 IGLV1-51P01701 117 aa12.98□□□□□ -0.33
CBFA2T3-206ENST00000563920 CT83Q5H943 113 aa12.98□□□□□ -0.33
CBFA2T3-206ENST00000563920 OR4B1Q8NGF8 309 aa12.98□□□□□ -0.33
CBFA2T3-206ENST00000563920 SMIM6P0DI80 62 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 TRRAPQ9Y4A5 3859 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 MRPL54Q6P161 138 aaKnown RBP12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
CBFA2T3-206ENST00000563920 IGKV3D-20A0A0C4DH25 116 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 TMEM189A5PLL7 270 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 RBMY1BA6NDE4 496 aaKnown RBP12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 RBMY1EA6NEQ0 496 aaKnown RBP12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 A8MWL6 223 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 RBMY1DP0C7P1 496 aaKnown RBP12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 CRISP2P16562 243 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 FOXI2Q6ZQN5 318 aa12.96□□□□□ -0.33
CBFA2T3-206ENST00000563920 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 ACTL10Q5JWF8 245 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 AMTNQ6UX39 209 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 TRAV9-1A0A075B6T8 112 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 GRIFINA4D1Z8 144 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 OR4C46A6NHA9 309 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 ORM1P02763 201 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 NAT8BQ9UHF3 227 aa12.95□□□□□ -0.34
CBFA2T3-206ENST00000563920 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
CBFA2T3-206ENST00000563920 KLLNB2CW77 178 aa12.94□□□□□ -0.34
CBFA2T3-206ENST00000563920 M0R2Z0 102 aa12.94□□□□□ -0.34
CBFA2T3-206ENST00000563920 H3BMM0 161 aa12.93□□□□□ -0.34
CBFA2T3-206ENST00000563920 GPX1P07203 203 aa12.93□□□□□ -0.34
CBFA2T3-206ENST00000563920 FXYD7P58549 80 aa12.93□□□□□ -0.34
CBFA2T3-206ENST00000563920 LINC01559Q495D7 138 aa12.93□□□□□ -0.34
CBFA2T3-206ENST00000563920 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
CBFA2T3-206ENST00000563920 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 HLA-DRB4P13762 266 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 HLA-DRB4X5D2U9 266 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 CD7P09564 240 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 FOXA3P55318 350 aaPredicted RBP12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 SPINK13Q1W4C9 94 aa12.92□□□□□ -0.34
CBFA2T3-206ENST00000563920 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms