RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GALR1P47211 349 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 CAMLGP49069 296 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 PLP1P60201 277 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 HIST1H1AQ02539 215 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-204ENST00000563739 GFI1BQ5VTD9 330 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 EIF5AL1Q6IS14 154 aaKnown RBP6.98□□□□□ -1.29
SF3B3-204ENST00000563739 ZNF493Q6ZR52 646 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 OR1B1Q8NGR6 318 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 TMEM70Q9BUB7 260 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 SMIM3Q9BZL3 60 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 PFDN2Q9UHV9 154 aa6.98□□□□□ -1.29
SF3B3-204ENST00000563739 A0A087X0K7 114 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 PRAC2D3DTV9 90 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 MPDU1O75352 247 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 HYPMO75409 117 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 HTN1P15515 57 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 RAB31Q13636 194 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 C11orf72Q8NBR9 251 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 ZNF738Q8NE65 137 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 OR10J6PQ8NGY7 276 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 TMED6Q8WW62 240 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 ATP5SQ99766 215 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 NPCDR1Q9BY65 106 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 HIGD1AQ9Y241 93 aa6.97□□□□□ -1.29
SF3B3-204ENST00000563739 S100A7P31151 101 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 SULT1A2P50226 295 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 PXDC1Q5TGL8 231 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 MIC13Q5XKP0 118 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 Q6ZSA8 131 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
SF3B3-204ENST00000563739 SAT2Q96F10 170 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-204ENST00000563739 SHANK2-AS3Q9BTD1 123 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 WDR61Q9GZS3 305 aaKnown RBP6.96□□□□□ -1.3
SF3B3-204ENST00000563739 PXMP4Q9Y6I8 212 aa6.96□□□□□ -1.3
SF3B3-204ENST00000563739 H7BYZ3 331 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 COX7A2P2O60397 106 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 OR5G3P0C626 314 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 SEC11BP0C7V7 166 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 CDKN1BP46527 198 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 RPL29P47914 159 aaKnown RBP6.95□□□□□ -1.3
SF3B3-204ENST00000563739 ZNF266Q14584 549 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 PSG3Q16557 428 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 PATE2Q6UY27 113 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 LINC00467Q9BRT7 94 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 KCNIP2Q9NS61 270 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 SLC39A9Q9NUM3 307 aa6.95□□□□□ -1.3
SF3B3-204ENST00000563739 SLC17A3O00476 420 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 IFNA5P01569 189 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 BLOC1S1P78537 153 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
SF3B3-204ENST00000563739 TOR2AQ5JU69 321 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 Q6ZRG5 221 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 S100A7AQ86SG5 101 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 TMEM37Q8WXS4 190 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 GPR82Q96P67 336 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 PFDN5Q99471 154 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
SF3B3-204ENST00000563739 RAB19A4D1S5 217 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 EREGO14944 169 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
SF3B3-204ENST00000563739 RAB5CP51148 216 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 RHOBP62745 196 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 WFDC2Q14508 124 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 C10orf113Q5VZT2 155 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 LYPD5Q6UWN5 251 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 LINC00305Q7Z4B0 112 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 RPUSD4Q96CM3 377 aaKnown RBP6.93□□□□□ -1.3
SF3B3-204ENST00000563739 RNF24Q9Y225 148 aa6.93□□□□□ -1.3
SF3B3-204ENST00000563739 C17orf112F2Z3M2 114 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 TEX46H3BTG2 121 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 ATP6V0CP27449 155 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 GCSAMLQ5JQS6 135 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 MORN5Q5VZ52 161 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 UQCC3Q6UW78 93 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 HSD17B11Q8NBQ5 300 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 LYPD6BQ8NI32 183 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 SCGB1C1Q8TD33 95 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 DNAJC4Q9NNZ3 241 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 ZNF331Q9NQX6 463 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-204ENST00000563739 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
SF3B3-204ENST00000563739 IGLV5-52A0A0A0MRZ9 124 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 KRBOX1C9JBD0 128 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-204ENST00000563739 SNRPCP09234 159 aaKnown RBP6.91□□□□□ -1.3
SF3B3-204ENST00000563739 CT45A10P0DMU9 189 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 Q6ZQT7 251 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 OR2G3Q8NGZ4 309 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 GSN-AS1Q9NRJ2 163 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 PLA2G2DQ9UNK4 145 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 TIMM9Q9Y5J7 89 aa6.91□□□□□ -1.3
SF3B3-204ENST00000563739 UMAD1C9J7I0 102 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms