RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 K7EIM0 57 aa8.21□□□□□ -1.09
RNF40-204ENST00000563683 TMEM75Q8N9X5 138 aa8.21□□□□□ -1.09
RNF40-204ENST00000563683 FSTL3O95633 263 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 GP9P14770 177 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 H3BRN7 92 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 I3L2K1 104 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 LINC00574Q9H8X3 128 aa8.21□□□□□ -1.1
RNF40-204ENST00000563683 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 TEX22C9J3V5 150 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 PDE6HQ13956 83 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 ADAMTSL5Q6ZMM2 481 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 DSPP15924 2871 aaKnown RBP8.2□□□□□ -1.1
RNF40-204ENST00000563683 UBE2E1P51965 193 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 VGLL1Q99990 258 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 MOB4Q9Y3A3 225 aa8.2□□□□□ -1.1
RNF40-204ENST00000563683 AZU1P20160 251 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 ASIPP42127 132 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 TMEM14CQ9P0S9 112 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 PRR25Q96S07 402 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 TRBV6-1A0A0K0K1D8 114 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 CD300EQ496F6 205 aaPredicted RBP8.19□□□□□ -1.1
RNF40-204ENST00000563683 NDUFA3O95167 84 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 SCGB1C2P0DMR2 95 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 ADORA2A-AS1P86434 159 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 FOXE3Q13461 319 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 GTSF1LQ9H1H1 148 aa8.19□□□□□ -1.1
RNF40-204ENST00000563683 FRYQ5TBA9 3013 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 SMAGPQ0VAQ4 97 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 C16orf54Q6UWD8 224 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 ZFYVE26Q68DK2 2539 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 LCNL1Q6ZST4 164 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 MAPK1IP1LQ8NDC0 245 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 OR11H6Q8NGC7 330 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 DYNLRB2Q8TF09 96 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 SCGB3A1Q96QR1 104 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 ATP6V0BQ99437 205 aa8.18□□□□□ -1.1
RNF40-204ENST00000563683 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 ZNF56Q15929 161 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 Q1RN00 199 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 DUX5Q96PT3 197 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 SMPXQ9UHP9 88 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 IGHV3OR16-12A0A075B7B8 117 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 F8W1H4 67 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 PRSS57Q6UWY2 283 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
RNF40-204ENST00000563683 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
RNF40-204ENST00000563683 FAM104BQ5XKR9 115 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
RNF40-204ENST00000563683 BCL6BQ8N143 479 aaPredicted RBP8.17□□□□□ -1.1
RNF40-204ENST00000563683 TRBV7-1A0A0A6YYK4 115 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 ATP5LO75964 103 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 CRYGCP07315 174 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 CD7P09564 240 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 ZFP36P26651 326 aaKnown RBP8.16□□□□□ -1.1
RNF40-204ENST00000563683 FAM110DQ8TAY7 271 aaPredicted RBP8.16□□□□□ -1.1
RNF40-204ENST00000563683 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 ABCA2Q9BZC7 2435 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 FREM2Q5SZK8 3169 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 NACAE9PAV3 2078 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 PCSK5Q92824 1860 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 OR11H12B2RN74 326 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.16□□□□□ -1.1
RNF40-204ENST00000563683 HERVK_113P61574 105 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 OR11H1Q8NG94 326 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 OR11H2Q8NH07 326 aa8.16□□□□□ -1.1
RNF40-204ENST00000563683 OVOL3O00110 214 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 MRPL51Q4U2R6 128 aaKnown RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 PCP2Q8IVA1 136 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 PIFOQ8TCI5 191 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 KIR2DL4Q99706 377 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 ZNF256Q9Y2P7 627 aaPredicted RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 ZNF688P0C7X2 276 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 EGR2P11161 476 aaPredicted RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 HOXB4P17483 251 aaPredicted RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
RNF40-204ENST00000563683 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 TSSC4Q9Y5U2 329 aaPredicted RBP8.15□□□□□ -1.1
RNF40-204ENST00000563683 A0A096LNJ9 63 aa8.15□□□□□ -1.11
RNF40-204ENST00000563683 CTSGP08311 255 aa8.15□□□□□ -1.11
RNF40-204ENST00000563683 TTC9CQ8N5M4 171 aa8.15□□□□□ -1.11
RNF40-204ENST00000563683 U3KQK5 164 aa8.15□□□□□ -1.11
RNF40-204ENST00000563683 FCN3O75636 299 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 IGLV11-55A0A075B6I3 123 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 SPRY2O43597 315 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 IGLV2-11P01706 119 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 RHPN1-AS1Q9BWJ2 59 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 DYNAPQ8N1N2 210 aa8.14□□□□□ -1.11
RNF40-204ENST00000563683 MTURNQ8N3F0 131 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms