RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
ABCA3-203ENST00000563623 FGF6P10767 208 aa9.23□□□□□ -0.93
ABCA3-203ENST00000563623 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
ABCA3-203ENST00000563623 A0A1B0GWB2 263 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 PF4V1P10720 104 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 SPANXN1Q5VSR9 72 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 LAMA5O15230 3695 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 PRAC2D3DTV9 90 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 HOXB4P17483 251 aaPredicted RBP9.22□□□□□ -0.93
ABCA3-203ENST00000563623 PDE6HQ13956 83 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 ZNF493Q6ZR52 646 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 MYOZ3Q8TDC0 251 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 FANCD2OSQ96PS1 177 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 NDUFA3O95167 84 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 NDPQ00604 133 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 WFDC2Q14508 124 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 DYNAPQ8N1N2 210 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 DPF1Q92782 380 aa9.22□□□□□ -0.93
ABCA3-203ENST00000563623 AKAP13Q12802 2813 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 IGKV2D-26A0A0A0MRZ7 120 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 TRBV6-1A0A0K0K1D8 114 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 A0A1W2PPM0 123 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 WI2-2373I1.2A0A1W2PRP0 233 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 SPRY2O43597 315 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 IGKCP01834 107 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 FXYD2P54710 66 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 IL17RELQ6ZVW7 336 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.93
ABCA3-203ENST00000563623 DMXL1Q9Y485 3027 aa9.21□□□□□ -0.94
ABCA3-203ENST00000563623 IGKV3-7A0A075B6H7 116 aa9.21□□□□□ -0.94
ABCA3-203ENST00000563623 DEFB104AQ8WTQ1 72 aa9.21□□□□□ -0.94
ABCA3-203ENST00000563623 RNF5Q99942 180 aa9.21□□□□□ -0.94
ABCA3-203ENST00000563623 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
ABCA3-203ENST00000563623 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 SPG11Q96JI7 2443 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 ID1P41134 155 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 GAGE5Q13069 117 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 GAGE6Q13070 117 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 CLEC19AQ6UXS0 136 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCA3-203ENST00000563623 TMEM8BA6NDV4 472 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 RPL11P62913 178 aaKnown RBP9.2□□□□□ -0.94
ABCA3-203ENST00000563623 ATMQ13315 3056 aa9.2□□□□□ -0.94
ABCA3-203ENST00000563623 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
ABCA3-203ENST00000563623 DPM2O94777 84 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 C15orf32Q32M92 178 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 HIST1H4GQ99525 98 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
ABCA3-203ENST00000563623 IGLV11-55A0A075B6I3 123 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 ZNF562Q6V9R5 426 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 LCNL1Q6ZST4 164 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 OVOL3O00110 214 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 DTX2Q86UW9 622 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
ABCA3-203ENST00000563623 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
ABCA3-203ENST00000563623 CFHR4Q92496 578 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 TRGV3P03979 118 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 CTSGP08311 255 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 EFNA4P52798 201 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 VMO1Q7Z5L0 202 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
ABCA3-203ENST00000563623 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 ZZEF1O43149 2961 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 M0R381 172 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 UFSP1Q6NVU6 142 aa9.18□□□□□ -0.94
ABCA3-203ENST00000563623 AGRNO00468 2067 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 CCL21O00585 134 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 FOXC1Q12948 553 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 SYT8Q8NBV8 401 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 U3KQK5 164 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 H3BVH4 76 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 MGPP08493 103 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
ABCA3-203ENST00000563623 SMAD5-AS1Q9Y6J3 95 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 TRBV25-1A0A075B6N4 114 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 Q8NA96 180 aa9.17□□□□□ -0.94
ABCA3-203ENST00000563623 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 G3V318 75 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 H3BMG7 143 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 YAE1D1Q9NRH1 226 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 LRBAP50851 2863 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 ATP5LO75964 103 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 IGLC6P0CF74 106 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
ABCA3-203ENST00000563623 IGHV3OR16-10A0A075B7F0 116 aa9.15□□□□□ -0.94
ABCA3-203ENST00000563623 APOMO95445 188 aa9.15□□□□□ -0.94
ABCA3-203ENST00000563623 AGPAT4-IT1Q9H0P7 198 aa9.15□□□□□ -0.94
ABCA3-203ENST00000563623 PRTN3P24158 256 aa9.15□□□□□ -0.94
ABCA3-203ENST00000563623 Q6ZQT7 251 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms