RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CASC2Q6XLA1 102 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 TMEM91Q6ZNR0 172 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 DEFB132Q7Z7B7 95 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 BORCS5Q969J3 196 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 METTL1Q9UBP6 276 aaKnown RBP0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PAIP2BQ9ULR5 123 aaKnown RBP0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 TNFSF18Q9UNG2 199 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 C22orf24Q9Y442 160 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 ARHGEF10O15013 1369 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 TET1Q8NFU7 2136 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 OVOS2A0A0J9YW53 1432 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PTPRGP23470 1445 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 ARHGAP31Q2M1Z3 1444 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 OVOS2Q6IE36 1432 aa0.53□□□□□ -2.32
HMGB1P33-201ENST00000563485 PEAK1Q9H792 1746 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 KIAA1549LQ6ZVL6 1849 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 MGAMO43451 1857 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 ZGRF1Q86YA3 2104 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 A0A096LPI6 279 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 TRAV2A0A0B4J234 112 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 C5orf58C9J3I9 102 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 NCR2O95944 276 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 SLC25A5P05141 298 aaKnown RBP0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 HIST1H1BP16401 226 aaKnown RBP0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 EVI2AP22794 236 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 SDC4P31431 198 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 BLCAPP62952 87 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 LINC00575Q6W349 94 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 ZCCHC23Q6ZST2 131 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 GKN2Q86XP6 184 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 C10orf111Q8N326 155 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 TEX29Q8N6K0 151 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 TCTEX1D1Q8N7M0 179 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 AP1S3Q96PC3 154 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 AMELYQ99218 206 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 TMEM138Q9NPI0 162 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 NIT2Q9NQR4 276 aa0.52□□□□□ -2.33
HMGB1P33-201ENST00000563485 A0A1B0GW64 132 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 DISP2A7MBM2 1401 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 M0QZK8 103 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 ARPC5O15511 151 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 YPEL1O60688 119 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 IGLV3-1P01715 115 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 TCRAP04437 139 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 GYPBP06028 91 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 PAEPP09466 180 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 MPC1LP0DKB6 136 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 HLA-DRB4P13762 266 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 AKR1D1P51857 326 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 SPATA45Q537H7 98 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 HSD17B12Q53GQ0 312 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 SPRNQ5BIV9 151 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 SBSPONQ8IVN8 264 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 OR10AC1Q8NH08 325 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 BRK1Q8WUW1 75 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 SLC35B3Q9H1N7 401 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 DNAJC15Q9Y5T4 150 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 HLA-DRB4X5D2U9 266 aa0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 ZNF469Q96JG9 3925 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P33-201ENST00000563485 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 KDM5CP41229 1560 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 FGD6Q6ZV73 1430 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 PRG4Q92954 1404 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 CPDO75976 1380 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 C3orf85A0A1B0GTC6 90 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 A0A1W2PPB8 328 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 A0A1W2PRS3 328 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 KIR3DP1A8MWS1 328 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 CDC42EP2O14613 210 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 SMIM24O75264 130 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 SULT1C4O75897 302 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 PPYP01298 95 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 IGF2P01344 180 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 PRB4P10163 310 aaPredicted RBP0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 CMPK1P30085 196 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 ARPC4P59998 168 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 PLGLB1Q02325 96 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 TMEM244Q5VVB8 128 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 C10orf99Q6UWK7 81 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 MMGT1Q8N4V1 131 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 OTOSQ8NHW6 89 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 MAFIPQ8WZ33 124 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 FKBP11Q9NYL4 201 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 GSKIPQ9P0R6 139 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 MYH1P12882 1939 aa0.5□□□□□ -2.33
HMGB1P33-201ENST00000563485 KIAA0100Q14667 2235 aaKnown RBP0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 PTPRDP23468 1912 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 M0R2P5 195 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 CD3DP04234 171 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 HMGN1P05114 100 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 CD14P08571 375 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 KDELR1P24390 212 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 CKS2P33552 79 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 CKS1BP61024 79 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 SMCO1Q147U7 214 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 RHOHQ15669 191 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 SMIM21Q3B7S5 101 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 ATP11AUNQ6ZP68 121 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 C3orf62Q6ZUJ4 267 aa0.49□□□□□ -2.33
HMGB1P33-201ENST00000563485 NDUFA11Q86Y39 141 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms